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Items tagged with "alignment" (43)
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BioExtract Server Workflow Tutorial
Created: 2009-08-07 16:20:06 | Last updated: 2009-08-07 16:25:46
Credits:
Carol Lushbough
License: Creative Commons Attribution-Share Alike 3.0 Unported License
File type: Word 2007 document
Comments: 0 | Viewed: 97 times | Downloaded: 59 times
Tags:
BioExtract Server Workflow Tutorial
Created: 2009-08-07 16:04:23 | Last updated: 2009-08-07 16:23:53
1 item in this pack
Comments: 0 | Viewed: 110 times | Downloaded: 32 times
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EBI_ClustalW2
(2)
Created: 2009-04-07 | Last updated: 2010-12-06
Credits:
Hamish McWilliam
EBI_ClustalW_alignment_tree
(2)
Created: 2008-05-31 | Last updated: 2010-12-03
Credits:
Hamish McWilliam
Attributions:
EBI_ClustalW2
EBI_ClustalW2_phylogentic_tree
Protein_search_fetch_align_tree
(2)
Created: 2009-04-07
Credits:
Hamish McWilliam
Attributions:
EBI_ClustalW2
EBI_ClustalW2_phylogentic_tree
EBI_dbfetch_fetchBatch
EBI_WU-BLAST
Protein_alignment_transmembrane
(1)
Created: 2008-06-01
Credits:
Hamish McWilliam
Attributions:
EBI_FASTA
EBI_ClustalW2
EBI_dbfetch_fetchBatch
EBI_Kalign
(1)
Created: 2008-06-02 | Last updated: 2010-12-06
Credits:
Hamish McWilliam
EBI_MAFFT
(1)
Created: 2008-06-03 | Last updated: 2010-12-06
Credits:
Hamish McWilliam
EBI_MUSCLE
(1)
Created: 2008-06-03 | Last updated: 2010-12-06
Credits:
Hamish McWilliam
EBI_TCoffee
(1)
Created: 2008-06-03 | Last updated: 2010-12-06
Credits:
Hamish McWilliam
mustang provides structural alignment of t...
(3)
Created: 2008-08-20 | Last updated: 2008-08-25
Credits:
Steffen Möller
Attributions:
Fetch PDB flatfile from RCSB server
Liliopsida Protein Alignment
(6)
Created: 2010-01-13 | Last updated: 2010-11-17
Credits:
Carol Lushbough
Created: 2009-02-19 | Last updated: 2009-06-08
Credits:
Youguruozhu
fetch_fasta
(1)
Created: 2009-03-20 | Last updated: 2009-03-20
Credits:
Jumblejumble
Multiple Protein Alignment Profiling(1)
(4)
Created: 2010-01-13 | Last updated: 2010-11-17
Credits:
Carol Lushbough
Alan Williams
Attributions:
A workflow version of the EMBOSS tutorial
Biomart and EMBOSS analysis
(1)
Created: 2009-07-03 | Last updated: 2009-07-03
Credits:
Stian Soiland-Reyes
Attributions:
BiomartAndEMBOSSAnalysis
BioMart and Emboss Analysis (T2)
(1)
Created: 2009-09-15
Credits:
Katy Wolstencroft
Alan Williams
Attributions:
BiomartAndEMBOSSAnalysis
Kabsch Alignment of Small Molecules
(1)
Created: 2009-10-30
Credits:
Egon Willighagen
M_Fetch_e-T_phylo_boot - (BETA)
(1)
Created: 2010-03-10 | Last updated: 2010-03-10
Credits:
Achille Zappa
Hamish McWilliam
Create custom-made GPCR alignments
(1)
Created: 2010-08-24 | Last updated: 2010-08-24
Credits:
Bas Vroling
Sff2Fasta_Blast_ParseBlast
(1)
Created: 2010-09-22 | Last updated: 2010-09-22
Credits:
Barbera van Schaik
Antoine van Kampen
Angela Luijf
Silvia Olabarriaga
Sff2Fasta_Blat
(1)
Created: 2010-09-22 | Last updated: 2010-09-22
Credits:
Barbera van Schaik
Antoine van Kampen
Angela Luijf
Silvia Olabarriaga
Sff2Fasta_Blast_Blat_ParseBlast
(1)
Created: 2010-09-22 | Last updated: 2010-09-22
Credits:
Barbera van Schaik
Antoine van Kampen
Angela Luijf
Silvia Olabarriaga
Created: 2010-12-06 | Last updated: 2013-03-28
Attributions:
EBI_ClustalW2
Created: 2010-12-13 | Last updated: 2010-12-13
Attributions:
BLAST using DDBJ service
Biomart and Blast with concatinated gene id
(1)
Created: 2010-12-13 | Last updated: 2010-12-13
Attributions:
BLAST using DDBJ service
Biomart and Blast
Created: 2011-01-17 | Last updated: 2013-01-30
Credits:
Katy Wolstencroft
Hamish McWilliam
Attributions:
EMBL-EBI ClustalW2 (SOAP)
EBI_ClustalW2
mrFAST Indexing and Mapping
(1)
Created: 2011-04-05 | Last updated: 2011-04-05
Credits:
Pipeline
Created: 2011-01-27 | Last updated: 2012-09-04
Credits:
Katy Wolstencroft
Alan Williams
Attributions:
BiomartAndEMBOSSAnalysis
tblastx non-redundant alignment
(1)
Created: 2011-06-30 | Last updated: 2011-07-04
Credits:
Carol Lushbough
Simple protein distance phylogeny workflow
(1)
Created: 2011-09-22 | Last updated: 2011-09-22
de Bruin et al. Workflow 1
(1)
Created: 2012-08-01 | Last updated: 2012-08-01
Credits:
Magnus Palmblad
de Bruin et al. Workflow 2
(1)
Created: 2012-08-01 | Last updated: 2012-08-01
Credits:
Magnus Palmblad
de Bruin et al. Workflow 3
(1)
Created: 2012-08-01 | Last updated: 2012-08-01
Credits:
Magnus Palmblad
de Bruin et al. Workflow 4
(1)
Created: 2012-08-01 | Last updated: 2012-08-01
Credits:
Magnus Palmblad
NCBI Protein Clustal Omega Alignment
(1)
Created: 2012-08-31
Credits:
Carol Lushbough
Non-redundant protein alignments
(1)
Created: 2012-12-19 | Last updated: 2012-12-19
Credits:
Carol Lushbough
Created: 2013-01-28 | Last updated: 2013-01-30
Credits:
Katy Wolstencroft
Hamish McWilliam
Attributions:
Protein_search_fetch_align_tree
Created: 2013-01-28 | Last updated: 2013-03-11
Credits:
Katy Wolstencroft
Created: 2013-01-28 | Last updated: 2013-01-30
Credits:
Katy Wolstencroft
EBI_NCBI_BLAST
(4)
Created: 2011-01-17 | Last updated: 2013-05-30
Credits:
Katy Wolstencroft
Hamish McWilliam
Attributions:
EBI_NCBI_BLAST
Find compounds pharmacology and align agai...
(1)
Created: 2013-10-16
Credits:
Stian Soiland-Reyes
Katy Wolstencroft
Attributions:
Blast_Align_and_Tree
Quantitation of identified proteins from M...
(1)
Created: 2014-12-08 | Last updated: 2015-08-19
Credits:
Arzu Tugce Guler