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Workflow getPubMedIdsFromUniprotIds (1)

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This service is invoking UniprotAPI to retrive PubMedIds for articles associated with the list of UniprotIds provided in the input. It is using Axis2 webservice created using UniprotAPI and published with wsdl. Example uniprotIds for input: "Q5VWZ2"

Created: 2009-07-09

Credits: User Jelena (Obradovic) Dreskai

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Workflow BioQuali synchronous workflow (1)

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BioQuali: Network Compatibility and products variation inference in a biological network. Help page: http://genoweb2.irisa.fr/claroline/claroline/course/index.php?cid=BIOQUALI Reference: Carito Guziolowski, Annabel Bourdé, Francois Moreews and Anne Siegel BioQuali Cytoscape plugin: analysing the global consistency of regulatory networks BMC Genomics 2009, 10:244 doi:10.1186/1471-2164-10-244 This web service is made available on GenOuest bioinformatics platform (...

Created: 2009-07-06 | Last updated: 2009-07-06

Credits: User abretaud Network-member GenOUEST Platform

Workflow Tuiuiu synchronous workflow (1)

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Tuiuiu removes from a sequence or from a set of sequences areas as large as possible that do not contain researched repeats. Tuiuiu is used as a preliminary step before applying a multiple local aligner tool. Modeling and algorithmic details are provided in the following paper. Please, cite this paper if you use Tuiuiu. P. Peterlongo, G. Sacomoto, A. Pereira do Lago, N. Pisanti, M.-F. Sagot Lossless filter for multiple repeats with bounded edit distance BMC Algorithms for Mole...

Created: 2009-06-29 | Last updated: 2009-06-29

Credits: User http://osallou.myopenid.com/ Network-member GenOUEST Platform

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Avatar Rob

Workflow myWorkflow (2)

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Created: 2009-06-09

Credits: User Rob

Creator

Pack projekt v2


Created: 2009-06-08 11:12:52 | Last updated: 2009-06-17 14:34:18

Example project. It takes geographical coordinates and search target(ex. "pubs") to find them near the capital city of a country containing these coordinates.

6 items in this pack

Comments: 0 | Viewed: 23 times | Downloaded: 6 times

This Pack has no tags!

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Blob EPR-Solver

Created: 2009-06-05 16:46:06 | Last updated: 2009-06-05 18:10:35

Credits: User booiiing

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This little perl-script automatically probes all assignments (g1, g2, g3) to (gx, gy, gz) (including negated values) in EPR/ESR (electron paramagnetic resonance / electron spin resonance) and tests them for several conditions. In the end, it gives you the assignements, as well as Eg, E1, E2, V/Delta and a, b, c. It is published under the terms of the GNU General Public Licence. Thus uploading is allowed for everyone to make it easier to contribute.

File type: Trident (Package)

Comments: 0 | Viewed: 62 times | Downloaded: 114 times

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Pack Network Analysis


Created: 2009-06-05 14:01:31 | Last updated: 2009-06-05 14:01:56

Workflows that employ (social) network analysis.

3 items in this pack

Comments: 0 | Viewed: 84 times | Downloaded: 26 times

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Pack Metadata Management


Created: 2009-06-05 13:54:55 | Last updated: 2009-06-05 13:55:34

Workflows dealing with creating and updating metadata records.

3 items in this pack

Comments: 0 | Viewed: 62 times | Downloaded: 20 times

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Workflow caviar cardiac application (1)

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Applications details in the following paper: Ketan Maheshwari, Tristan Glatard, Joel Schaerer, Bertrand Delhay, Sorina Camarasu, Patrick Clarysse, Johan Montagnat. "Towards Production-level Cardiac Image Analysis with Grids" in Proceedings of the HealthGrid'09, Berlin, 28-30 june 2009 The 3 green boxes are run on the EGEE grid. Addional Beanshells have been added to transfer results from EGEE Storage Elements to a web server, to allow for better interactivity.

Created: 2009-05-23 | Last updated: 2009-05-23

Credits: User Glatard

Workflow inchi to Chebi (1)

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This workflow converts an inchi string to a chebi id.

Created: 2009-05-22

Credits: User Paul Fisher

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