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Workflow GetReactions (1)

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This workflow takes an arbitrary SBML model from the BioModels database and returns a list of reactions contained in that model.

Created: 2009-05-19 | Last updated: 2009-05-19

Credits: User Duncan Hull

Creator

Pack Supporting material for Roos et al., BMC Bioinformat...


Created: 2009-05-15 15:45:32 | Last updated: 2011-08-11 10:01:23

Supporting material for BMC Bioinformatics, supplement for Semantic Web Applications and Tools for Life Science (2009) Structuring and extracting knowledge for the support of hypothesis generation in molecular biology Marco Roos, M. Scott Marshall, Andrew P. Gibson, Martijn Schuemie, Edgar Meij, Sophia Katrenko, Willem Robert van Hage, Konstantinos Krommydas, Pieter W. Adriaans Acknowledgements We thank the myGrid team and OMII-UK for their support in applying their e-Science tools, and M...

5 items in this pack

Comments: 0 | Viewed: 133 times | Downloaded: 46 times

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Workflow simpleBLAST workflow (2)

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my first taverna workflow

Created: 2009-05-13

Credits: User Shahid

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Blob The impact of workflow tools on data-centric research

Created: 2009-05-05 23:59:48

Credits: User David De Roure User Carole Goble

Attributions: Workflow Pathways and Gene annotations for QTL region

License: Creative Commons Attribution-Share Alike 3.0 Unported License

final draft article for Tony Hey and Kristin Tolle's book "Data Intensive Computing: The Fourth Paradigm of Scientific Discovery"

File type: Adobe PDF

Comments: 0 | Viewed: 99 times | Downloaded: 107 times

This File has no tags!

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Blob Word file for myExperiment CCPE paper

Created: 2009-04-10 13:40:18 | Last updated: 2009-04-21 15:01:57

Credits: Network-member CCPE eScience 2008 special issue myExperiment paper co-authors

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Note this is not in any aprticular CCPE template as they only provide a LaTeX template

File type: Word document

Comments: 0 | Viewed: 68 times | Downloaded: 149 times

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Workflow Get relations (1)

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This workflow gets all the realtions from a given Ondex graph

Created: 2009-02-27

Credits: User Paul Fisher

Workflow Get Evidence Types (1)

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This workflow gets all the evidence types within a specified Ondex graph

Created: 2009-02-27

Credits: User Paul Fisher

Workflow Get CVs (1)

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This workflow lets users retrive all controlled vocabularies for a given Ondex graph

Created: 2009-02-27

Credits: User Paul Fisher

Workflow Bio2RDF: Bind fulltext search service retu... (1)

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SELECT ?s FROM <http://soap.bind.ca/wsdl/bind.wsdl> WHERE {   ?s, ?p, ?o .   FILTER ( regex(?o, "query")) . }

Created: 2009-02-19 | Last updated: 2009-02-19

Credits: User Francois Belleau

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Blob ONDEX Graph from the Yeast Jamboree SBML

Created: 2009-02-10 10:51:58 | Last updated: 2009-02-10 12:48:52

Credits: User Paul Dobson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The oxl file represents in ONDEX the SBML reconstruction of yeast metabolism produced in the "Jamboree", as described in the following paper.   PMID 18846089 A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. Nature Biotechnology. 2008 Oct;26(10):1155-60. Herrgård MJ, Swainston N, Dobson P, Dunn WB, Arga KY, Arvas M, Blüthgen N, Borger S, Costenoble R, Heinemann M, Hucka M, Le Novère N, Li P, Lieb...

File type: GNU Zip Archive

Comments: 0 | Viewed: 617 times | Downloaded: 53 times

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