EBI_DaliLite

Created: 2008-06-07 17:16:37

Pairwise structure comparison using the DaliLite tool. The EBI's WSDaliLite web service (see http://www.ebi.ac.uk/Tools/webservices/services/dalilite) is used to access the tool.

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/233/download?version=1
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Inputs (5)

Name	Description
Structure_1	Input structure 1. Either structure in PDB format or PDB identifier (e.g. 2A4C).
Structure_2	Input structure 2. Either structure in PDB format or PDB identifier (e.g. 2A4E).
Email_address	Use e-mail address.
Chain_ID_1	Chain in structure 1 to align (e.g. A).
Chain_ID_2	Chain in structure 2 to align (e.g. A).

Processors (5)

Name	Type	Description
runDaliLite	arbitrarywsdl	Submit a DaliLite analysis job (see http://www.ebi.ac.uk/Tools/webservices/services/dalilite#rundalilite_params_content)
Job_params	local
EBI_DaliLite_poll_job	workflow
Get_output	arbitrarywsdl	Get the results of a job (see http://www.ebi.ac.uk/Tools/webservices/services/dalilite#poll_jobid_type)
Unpack_output	local

Beanshells (1)

Name	Description	Inputs	Outputs
Is_done		job_status	is_done

Outputs (1)

Name	Description
DaliLite_output	DaliLite report output.

Links (10)