retrieve nucleotide sequence and do a BLAST from DDBJ Web services

Created: 2010-09-01 17:31:29      Last updated: 2010-09-01 17:33:51

retrieve nucleotide sequence and do a BLAST from DDBJ Web services

informations on Web services available at http://xml.nig.ac.jp/index.html

example :

accession : AB000100
database : DDBJ
program : blastn 

Information Preview

Information Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://myexperiment.org/workflows/1494/download?version=1
[ More InfoExpand ]


Information Workflow Components

Inputs (3)
Processors (2)
Beanshells (0)
Outputs (1)
Links (5)
Coordinations (0)

Information Workflow Type

Taverna 1

Information Uploader

Information License

All versions of this Workflow are licensed under:

Information Version 1 (of 1)

Information Credits (1)

(People/Groups)

Information Attributions (1)

(Workflows/Files)

Information Tags (5)

Log in to add Tags

Information Shared with Groups (0)

None

Information Featured In Packs (0)

None

Log in to add to one of your Packs

Information Attributed By (0)

(Workflows/Files)

None

Information Favourited By (0)

No one

Information Statistics

 

Citations (0)

None


Version History

In chronological order:



Reviews Reviews (0)

No reviews yet

Be the first to review!



Comments Comments (0)

No comments yet

Log in to make a comment




Workflow Other workflows that use similar services (51)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Uploader

Workflow retrieve protein sequence and do a BLAST a... (1)

Thumb
retrieve protein sequence and do a BLAST and extract position from DDBJ Web services   informations on Web services available at http://xml.nig.ac.jp/index.html example accession : Q9NRA8 database : UNIPROT program : blastp  

Created: 2010-07-21 | Last updated: 2010-07-21

Credits: User Lebreton

Attributions: Workflow BLAST using DDBJ service

Uploader

Workflow retrieve nucleotide sequence and do a high... (1)

Thumb
retrieve nucleotide sequence and do a high speed BLAST from DDBJ Web services informations on Web services available at http://xml.nig.ac.jp/index.html accession : AB000100 database : DDBJ program : blastn param : -b 5 -m 7

Created: 2010-09-01 | Last updated: 2010-09-01

Credits: User Lebreton