Content from the Taverna 1.7.1 workflow workbench examples group

BioMart and Emboss Analysis (T2) (1)

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This is the Taverna 2 version of the Biomart and Emboss Analysis workflow http://www.myexperiment.org/workflows/158   Using Biomart and EMBOSS soaplab services, This workflow retrieves a number of sequences from 3 species: mouse, human, rat; align them, and returns a plot of the alignment result. Corresponding sequence ids are also returned. Previous versions of this workflow only returned sequences with an ID mapped to a MIM_morbid_accession. This was primarily to reduce the numbe...

Created: 2009-09-15

Credits: Katy Wolstencroft Alan Williams

Attributions: BiomartAndEMBOSSAnalysis

Demonstration of configurable iteration (1)

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This workflow shows the use of the iteration strategy editor to ensure that only relevant combinations of inputs are used during an implicit iteration.

Created: 2008-03-05 | Last updated: 2008-03-25

Credits: Tomoinn

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Example XSLT file

Created: 2008-09-26 12:13:31

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Binary data

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Example XML file

Created: 2008-09-26 12:12:41

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: XML

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Example workflows for annotated web services

Created: 2008-09-29 11:57:45 | Last updated: 2008-09-29 13:34:14

1 item in this pack

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Example SwissProt Data

Created: 2008-09-25 15:09:03

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Plain text

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Example Genbank data

Created: 2008-09-25 15:00:28

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Plain text

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