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4399?size=60x60 Gb Paul Fisher
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Blob Bilateral Perisylvian Polymicrogyria (Epilepsy)

Created: 2010-12-07 16:34:31 | Last updated: 2010-12-07 16:34:37

Credits: User Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This zip file contains the results of running a QTL workflow for Bilateral Perisylvian Polymicrogyria in human (homo sapiens). Provided are a list of candidate QTL genes (QTg) and their corresponding KEGG pathways. Each gene and pathway have been subsequently run through a series of text mining workflows to determine the significance of each may play in relation to Bilateral Perisylvian Polymicrogyria AND/OR Epilepsy. Further to this, I have also collected the SNPs (single nucleotide...

File type: application/x-zip-compressed

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Avatar Richard Crane
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Blob new workflow data entry

Created: 2010-12-01 16:02:28 | Last updated: 2010-12-01 16:02:29

Credits: User Richard Crane

License: Creative Commons Attribution-Share Alike 3.0 Unported License

title says it all  

File type: application/x-download

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Avatar Pqmarkdev
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Blob Association of HLA Profiles

Created: 2010-11-17 18:33:50 | Last updated: 2010-11-17 18:33:51

Credits: User Pqmarkdev

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Assoc. of HLA profiles

File type: Adobe PDF

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688?size=60x60 Us M. Kirsh
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Blob Uniqueness, Self belonging and Intercourse in Nature...

Created: 2010-10-30 18:39:41 | Last updated: 2010-10-30 18:39:42

Credits: User M. Kirsh

License: Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License

  Uniqueness, Self belonging and Intercourse in Nature Marvin E. Kirsh ISBN: 3-8383-6737-8 Lambert Academic Publishing Saarbrücken, Germany Prologue and Preface

File type: Adobe PDF

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688?size=60x60 Us M. Kirsh
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Blob Mind Matter and Contour : A Two Timing Ether or a Wh...

Created: 2010-10-30 18:33:46 | Last updated: 2010-10-30 18:34:57

Credits: User M. Kirsh

License: Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License

  Abstract   Bronislaw Malinowskli, a pioneer of Anthropology as a science, proposed a scheme involving mirroring, need and symbolism with which to define a concept of culture founded on biological need. In light of the fact that all interpretation must be based on the physiological function of perception , an inclusive view of all natural and social processes occurring during the interval of witness associations, structured solely with respect to criteria of mirroring, need, ...

File type: Adobe PDF

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688?size=60x60 Us M. Kirsh
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Blob Evolution at the Surface of Euclid:Elements of a Lon...

Created: 2010-10-30 18:30:51 | Last updated: 2014-02-23 01:03:48

Credits: User M. Kirsh

License: Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License

Abstract       It is modernly debated whether application of the free will has potential to cause harm to nature. Power possessed to the discourse, sensory/perceptual, physical influences on life experience by the slow moving machinery of change is a viral element in the problems of civilization; failed resolution of historical paradox involving mind and matter is a recurring source of problems. Reference is taken from the writing of Euclid in which a oneness of nature...

File type: Adobe PDF

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1854?size=60x60 De Rapido
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Blob Training Data DAT

Created: 2010-10-21 18:15:51 | Last updated: 2010-10-21 18:15:52

Credits: User Rapido

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Training data DAT

File type: Plain text

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1854?size=60x60 De Rapido
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Blob Training Data AML

Created: 2010-10-21 18:11:43

Credits: User Rapido

License: Creative Commons Attribution-Share Alike 3.0 Unported License

naruto1.aml

File type: Plain text

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Avatar De maas
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Blob filter a sdfile by a list of ids, keep in memory

Created: 2010-10-05 14:40:24 | Last updated: 2010-10-05 14:40:26

Credits: User De maas

License: Creative Commons Attribution-Share Alike 3.0 Unported License

In order to speedup a second run keep the sd-file in memory. So use a list in stead of a iterator which reads from disk.

File type: JavaScript

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Avatar De maas
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Blob filter a sdfile by a list of ids

Created: 2010-10-05 11:17:35 | Last updated: 2010-10-05 11:18:37

Credits: User De maas

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Used an array to hold the ids but I'm curious if there is a better way like a (sorted) list or an index file.

File type: JavaScript

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1504?size=60x60 Nl Wbkoets
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Blob bowtie.properties

Created: 2010-09-16 11:31:11

Credits: User Wbkoets

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Properties file for Bowtie. Use this to change command line options.

File type: Trident (Package)

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1504?size=60x60 Nl Wbkoets
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Blob NGSPipeline.jar

Created: 2010-09-16 11:27:19 | Last updated: 2010-09-16 11:29:32

Credits: User Wbkoets

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Jar file for BowtieToPileup workflow. Copy to .taverna-x/lib.

File type: application/x-java-archive

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Avatar Nl Wladi
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Blob haarcascade fullbody

Created: 2010-08-13 13:33:54 | Last updated: 2010-08-13 13:33:56

Credits: User Wladi

License: BSD License

"Haar"-based Detectors For Pedestrian Detection =============================================== by Hannes Kruppa and Bernt Schiele, ETH Zurich, Switzerland 14x28 fullbody detector

File type: XML

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Avatar Nl Wladi
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Blob haarcascade eye tree eyeglasses

Created: 2010-08-13 13:29:17 | Last updated: 2010-08-13 13:29:19

Credits: User Wladi

License: BSD License

Tree-based 20x20 frontal eye detector with better handling of eyeglasses. Created by Shameem Hameed (http://umich.edu/~shameem)

File type: XML

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Avatar Tom Williams
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Blob Irrelevant document

Created: 2010-08-03 14:45:12

Credits: User Tom Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a totally irrelevant document. 

File type: Adobe PDF

Comments: 0 | Viewed: 7 times | Downloaded: 4 times

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Avatar Konstantin Kozlov
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Blob Interaction with OMERO server from ProStack - screen...

Created: 2010-08-03 07:25:46 | Last updated: 2010-08-03 07:25:49

Credits: User Konstantin Kozlov

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The modules of ProStack image processing platform are described that allow to: browse OMERO datasets, fetch an image for processing in ProStack, insert a resulting image into the dataset.

File type: video/mp4

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4011?size=60x60 Gb Alex Nenadic
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Blob Chemistry Web service set description file

Created: 2010-07-22 12:14:15

Credits: User Alex Nenadic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

An XML file containing the Chemistry Web services descriptions that can be loaded in Taverna in order to add this service set to the Taverna Workbench's "Available Services".

File type: XML

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25?size=60x60 England David Withers
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Blob Water Usage Spreadsheet

Created: 2010-07-13 11:32:25 | Last updated: 2010-07-13 11:36:38

Credits: User David Withers

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Excel spreadsheet for use as input for the Spreadsheet Import Example workflow.

File type: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet

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3791?size=60x60 Gb David De Roure
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Blob voID description for myExperiment

Created: 2010-07-10 08:42:35 | Last updated: 2010-07-10 09:02:05

Credits: User David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

 http://vocab.deri.ie/void/guide

File type: RDF data

Comments: 0 | Viewed: 39 times | Downloaded: 19 times

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Avatar Yoshinobu Kano
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Blob A U-Compare workflow to extract biological events fr...

Created: 2010-07-08 21:50:25 | Last updated: 2010-09-02 04:46:05

Credits: User Yoshinobu Kano

License: GNU Lesser General Public License (LGPL) 2.1

This is a U-Compare workflow to extract biological events from texts, provided to be used with our example Taverna workflow. See our publication Kano, et al., 2010,  "Text Mining Meets Workflow: Linking U-Compare with Taverna " http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btq464 for details. This file is formatted as a UIMA CPE workflow XML descriptor file.

File type: XML

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4011?size=60x60 Gb Alex Nenadic
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Blob NCBI Entrez Utilities Web service set description file

Created: 2010-07-06 14:40:27 | Last updated: 2010-07-06 14:42:59

Credits: User Alex Nenadic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

An XML file containing the NCBI Entrez Utilities Web services descriptions that can be loaded in Taverna in order to add this service set to the Taverna Workbench's "Available Services".

File type: XML

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469?size=60x60 Gb Paolo
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Blob OPM graph in RDF format for PC1_B workflow with same...

Created: 2010-06-25 01:10:59

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

this version of the OPM graph includes URLs to each of the data files, which have been uploaded to an ftp server so they can be shared.

File type: RDF data

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Avatar Leidou
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Blob COMAD20_API_Specification

Created: 2010-06-17 06:41:56 | Last updated: 2010-06-17 06:41:57

Credits: User Leidou

License: Creative Commons Attribution-Share Alike 3.0 Unported License

It's an API specification of COMAD20.

File type: application/x-zip-compressed

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Avatar Leidou
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Blob Comad20_User_Manual

Created: 2010-06-16 22:30:44 | Last updated: 2010-06-16 22:40:19

Credits: User Leidou

License: Creative Commons Attribution-Share Alike 3.0 Unported License

It's an user manual making fully introduction to COMAD20, including how to install and run COMAD20 workflow and its basic concepts.

File type: Adobe PDF

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469?size=60x60 Gb Paolo
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Blob Janus provenance graph (RDF)

Created: 2010-06-08 23:02:53 | Last updated: 2010-06-09 22:48:46

Credits: User Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

RDF instance file containing the entire provenance graph for once run of the PC1 mockup workflow. The RDF graph complies with the Janus ontology, which can be viewed here Caveat: implementation still under testing, file may still contain bugs  

File type: RDF data

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