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Items tagged with "snps" (8)

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Files (3)

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Paul Fisher

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Table of SNP sequenceing results

Created: 2009-04-08 13:29:32

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This file contains the results of re-sequencing the Daxx gene

File type: Word document

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Uploader

Paul Fisher

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Bilateral Perisylvian Polymicrogyria (Epilepsy)

Created: 2010-12-07 16:34:31 | Last updated: 2010-12-07 16:34:37

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This zip file contains the results of running a QTL workflow for Bilateral Perisylvian Polymicrogyria in human (homo sapiens). Provided are a list of candidate QTL genes (QTg) and their corresponding KEGG pathways. Each gene and pathway have been subsequently run through a series of text mining workflows to determine the significance of each may play in relation to Bilateral Perisylvian Polymicrogyria AND/OR Epilepsy. Further to this, I have also collected the SNPs (single nucleotide...

File type: application/x-zip-compressed

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Tags:

bilateral perisylvian polymicrogyria
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cosine vector space
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data-driven
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epilepsy
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gene identifier
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geneid
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genotype
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homo sapiens
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human
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literature
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pathway
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pathway-driven
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pathways
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phenotype
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pubmed
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re-use
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region
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snp
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snps
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text
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text mining
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text mining; term extraction; entity recognition

Uploader

Paul Fisher

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Bilateral Perisylvian Polymicrogyria - Single Nucleo...

Created: 2011-03-17 11:21:06 | Last updated: 2011-03-17 11:21:12

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This file contains a list of all the SNP found with the Villard et al., (2002) QTL for Bilateral Perisylvian Polymicrogyria. Please download this data as you wish, and use in whatever study you like. The data is open access, and freely available for all to use to help undertand this condition. Genes related to these SNP can be found in the file http://www.myexperiment.org/files/466.

File type: ZIP archive

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Workflows (5)

Taverna 1

Uploader

Fong Chun Chan

DataBiNS - Data Mining Workflow for Biolog... (2)

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Created: 2007-12-04 | Last updated: 2007-12-04

Credits: Fong Chun Chan

Taverna 2

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Munasultan

Diabetes_workflow (1)

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Created: 2011-03-31 | Last updated: 2011-03-31

Credits: Munasultan Banu

Taverna 2

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Banu

IDDM Workflow (1)

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Created: 2011-03-31 | Last updated: 2011-03-31

Credits: Banu Munasultan

Galaxy

Uploader

Peter Li

galaxy_101 (2)

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This is a Galaxy pipeline written using the Galaxy 101 tutorial (https://main.g2.bx.psu.edu/galaxy101). The pipeline involves retrieving genome and SNP data from UCSC for a particular chromosome. These data are integrated in order to find exons with the highest number of SNPs.