Workflows

VOTables from NED Web Services (1)

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Extraction of a sample of VOTables from all the NED Web Services present in paper 2007ASPC..382..165M Web-based Tools - NED VO Services (Mazzarella, J. M.; NED Team). The National Virtual Observatory: Tools and Techniques for Astronomical Research. ASP Conference Series, Vol. 382. Edited by M.J. Graham, M.J. Fitzpatrick, and T.A. McGlynn. San Francisco: Astronomical Society of the Pacific, 2007., p.165

Created: 2012-06-28 | Last updated: 2013-04-12

Credits: Jose Enrique Ruiz

Simple executable plan example (1)

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A simple executable plan containing a migration action component and a QA component. The migration action uses imagemagick convert. The QA component consists of two characterisation components (fits) and another QA components (imagemagick compare).

Created: 2012-06-29

Credits: Markus Plangg

Astronomical object name to equatorial coo... (1)

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 Resolve equatorial coordinates of a list of objects (names) with AstroTaverna plugin

Created: 2012-06-30 | Last updated: 2012-07-01

Credits: Jose Enrique Ruiz

VOTable of NED Images from a List of Objects (1)

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Extraction of metadata using NED Image Virtual Observatory Service into a single VOTable, providing a list of objects and the width for each field in arcmin. Among the most relevant metadata are the URL link to the FITS images. This Wf makes use of a Tool developed as an internal pyhton script file.

Created: 2012-07-01 | Last updated: 2012-07-01

Credits: Jose Enrique Ruiz

Attributions: Astronomical object name to equatorial coordinates Resolver

Get all applications available on the HPS (1)

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This workflow requests all available applications on the HPS which do not require authentication to run. No inputs. Outputs contain all information to execute the application on the HPS such as the ID of the application and the names of all parameters.

Created: 2012-07-03

Credits: Anja Le Blanc

Task Data Pattern (BeanShell) (1)

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This is a sample implementation of "Task Data" pattern intoduced workflowPatterns.com It defines a variable inside a Beanshell and uses the passed value through the processors input. Details: http://www.workflowpatterns.com/patterns/data/visibility/wdp1.php

Created: 2012-07-06

Get Concept IDs (5)

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Purpose: The workflow retrieves the concepts within a concept set. The Web service/workflow currently returns no values (bug).

Created: 2012-07-06 | Last updated: 2014-07-14

Credits: Kristina Hettne Reinout van Schouwen Martijn Schuemie Marco Roos BioSemantics

Get concept information (5)

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The workflow takes a (list of) concept ID(s) as input and returns the profile, ID, definition and name of the concept.

Created: 2012-07-06 | Last updated: 2014-07-14

Credits: Kristina Hettne Reinout van Schouwen Marco Roos Martijn Schuemie BioSemantics

List Concept Sets (3)

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Pupose: The workflow returns a list of all Concept Set IDs currently available in the database. The Concept Sets have an hierarchical structure that can be inferred by referring to the parent Concept Set ID.

Created: 2012-07-06 | Last updated: 2014-07-14

Credits: Kristina Hettne Marco Roos Reinout van Schouwen Martijn Schuemie BioSemantics

Gene to Pathways (1)

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This is a Taverna workflow that given a gene ID fetches the corespondondings pathways. To do so, the workflow make use of two KEGG web services.

Created: 2012-07-09 | Last updated: 2012-07-10

Credits: Khalid Belhajjame