Workflows

Find instruments of a special type in a se... (1)

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This workflow takes a type of isnstrument as input and the minimum and maxium coordinates in HCI as input. Cadence for the location service is for defining the 'continues' presence. Output is a VOTable based on the ICS return where two columns are added for the time this instrument has entered and exited the Region of Interest.

Created: 2011-08-24 | Last updated: 2011-08-24

Credits: Anja Le Blanc

Attributions: Find instruments of a special type in a section of space described in HCI coordinates

Find instruments of a special type in a se... (1)

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This workflow takes a type of isnstrument as input and the minimum and maxium coordinates in HCI as input. Cadence for the location service is for defining the 'continues' presence. Output is a VOTable based on the ICS return where two columns are added for the time this instrument has entered and exited the Region of Interest.

Created: 2011-08-24 | Last updated: 2011-08-24

Credits: Anja Le Blanc

BLAST your sequences against the NucleaRDB (1)

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BLAST your sequences against the NucleaRDB. Input requires a sequence with amino acids only (no fasta format etc)

Created: 2011-08-19 | Last updated: 2011-08-19

Credits: Bas Vroling

Rave Usability Lab Workflow (1)

Created: 2011-08-16 | Last updated: 2011-11-10

Credits: Liz Masterman

Split string into string list, new line se... (1)

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Split string into string list using new line as separator. Should work in Linux, Mac and Windows.

Created: 2011-08-15 | Last updated: 2014-02-26

Credits: Rafael C. Jimenez

Difference: Query - Reference (1)

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Difference bettwen the query list and the reference list. Things that are in the query and not in the reference.

Created: 2011-08-15 | Last updated: 2011-08-15

Credits: Rafael C. Jimenez

Plotting Training vs Testing Error (Loop +... (1)

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This process increases the parameter C of a support vector machine and hence also the risk for overfitting. It uses an outer loop operator for increasing the parameter value and an inner log operator for storing the current number of applications together with the current errors on the training and the testing data set. At the end of the process, the log data can be plotted (for example with the plotter "Scatter Multiple" with "Count" on the x-axis and both "Training Error" and "Testing Error...

Created: 2011-08-15

XML-RPC example current time (1)

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Using Apache ws-xmlrpc from Beanshell scripts to call time.xmlrpc.com - see http://www.xmlrpc.com/currentTime To use, download the JARs from http://ws.apache.org/xmlrpc/download.html (ie. http://apache.mirror.anlx.net//ws/xmlrpc/apache-xmlrpc-current-bin.zip ) - unzip and put into Taverna's home directory lib/ folder. Right-click on the Beanshell script and check the "Dependencies" tab to check that all JARs have been ticked off (minimum required: ws-common-util.jar, xmlrpc-client.jar and x...

Created: 2011-08-11 | Last updated: 2011-08-11

Credits: Stian Soiland-Reyes

OpenTox Learn and evaluate model (1)

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Learns a LoMoGraph model on the TUM servers and evaluates it using 10 fold cross validation.

Created: 2011-08-09

OpenTox Upload and merge data sets (1)

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Uploads 2 data sets to OpenTox, merges them and returns the merged data set.

Created: 2011-08-08 | Last updated: 2011-08-08