OpenTox Upload and merge data sets

Created: 2011-08-08 11:04:11 Last updated: 2011-08-08 11:05:05

Uploads 2 data sets to OpenTox, merges them and returns the merged data set.

Option 1:

Authors (0)

Titles (0)

Descriptions (0)

Dependencies (0)

Inputs (2)

Name	Description
dataset_1	A sdf file. Choose a file from the file selection menu.
dataset_2	A sdf file. Choose a file from the file selection menu.

Processors (16)

Name	Type	Description
merge_datasets	rest
dataset_uri	stringconstant	Value dataset_uri=
Concatenate_two_strings	localworker	Script output = string1 + string2;
Concatenate_two_strings_2	localworker	Script output = string1 + string2;
copy_dataset	rest
upload_file	rest
upload_file_2	rest
trim_url_2	beanshell	Script trimmed_url= url.trim();
trim_url_3	beanshell	Script trimmed_url= url.trim();
wait_for_task	rest
wait_for_task_2	rest
trim_url	beanshell	Script trimmed_url= url.trim();
trim_url_7	beanshell	Script trimmed_url= url.trim();
get_dataset	rest
parse_dataset_3_2	xpath	Xpath Expression /rdf:RDF/ot:Task/ot:resultURI
parse_dataset_3_3	xpath	Xpath Expression /rdf:RDF/ot:Task/ot:resultURI

Beanshells (4)

Name	Inputs	Outputs
trim_url_2	url	trimmed_url
trim_url_3	url	trimmed_url
trim_url	url	trimmed_url
trim_url_7	url	trimmed_url

Outputs (4)

Datalinks (22)

Source	Sink
Concatenate_two_strings_2:output	merge_datasets:inputBody
trim_url:trimmed_url	merge_datasets:dataset_uri
dataset_uri:value	Concatenate_two_strings:string1
parse_dataset_3_2:nodelist	Concatenate_two_strings:string2
dataset_uri:value	Concatenate_two_strings_2:string1
parse_dataset_3_3:nodelist	Concatenate_two_strings_2:string2
Concatenate_two_strings:output	copy_dataset:inputBody
dataset_1	upload_file:inputBody
dataset_2	upload_file_2:inputBody
upload_file:responseBody	trim_url_2:url
upload_file_2:responseBody	trim_url_3:url
trim_url_2:trimmed_url	wait_for_task:uri
trim_url_3:trimmed_url	wait_for_task_2:uri
copy_dataset:responseBody	trim_url:url
merge_datasets:responseBody	trim_url_7:url
trim_url_7:trimmed_url	get_dataset:dataset_uri
wait_for_task:responseBody	parse_dataset_3_2:xml_text
wait_for_task_2:responseBody	parse_dataset_3_3:xml_text
get_dataset:responseBody	result_dataset_content
trim_url_7:trimmed_url	result_dataset_uri
wait_for_task:status	status1
wait_for_task_2:status	status2