Microbial Metagenomic Trait Calculation an...
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This workflow calculates the microbial traits of your metagenome and retrieves additional traits data from the Microbial Metagenomic Trait Database http://mb3is.megx.net/mg-traits.
The list of traits:
- GC content
- Variance of GC content
- Dinucleotides
- Number of rRNA
- Codon usage
- Amino acid composition
- Acidic to basic amino acids ratio
- % of Transcriptional factors
- % of classified reads
- Functional content
- Functional diversity
- Taxonomic content
- Taxonomic diversity
As ...
Created: 2014-10-03
| Last updated: 2015-06-12
Credits:
Renzo
Antonio Fernandez-Guerra
Attributions:
Microbial Metagenomic Trait Statistical Analysis Workflow
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