test_model
Created: 2013-12-10 17:39:44
Last updated: 2014-12-04 15:23:59
Fixed error messages when checking job progress.
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Workflow Components
Authors (1)
| Alan R Williams & Renato De Giovanni |
Titles (1)
Descriptions (1)
| Test a model with openModeller. |
Dependencies (0)
Inputs (11)
| Name |
Description |
| model_xml |
Serialized model in XML.
|
| layers |
Newline separated list of layers for model testing.
|
| presence_points_xml |
Newline separated list of presence points that will be used to test the model.
|
| mask_id |
Mask id usded for model testing.
|
| calculate_matrix |
Indicates if confusion matrix should be calculated.
|
| calculate_roc |
Indicates if ROC curve should be calculated.
|
| absence_points_xml |
Newline separated list of absence points that will be used to test the model.
|
| num_background_points |
Number of background points to be used when calculating ROC curve (when no absence points are provided).
|
| threshold |
Threshold to be used when calculating confusion matrix.
|
| srs |
Spatial reference system for all points in WKT format.
|
| species_label |
Species name.
|
Processors (2)
| Name |
Type |
Description |
| make_xml |
beanshell |
Scriptxml = "\n"
+"\n"
+"\n"
+"\n"
+"\n";
int i = 0;
String[] s_layers = layers.split("\n");
for ( i = 0; i < s_layers.length; ++i ) {
if ( s_layers[i].length() > 0 ) {
xml += "\n";
if ( presence_points_xml.length() > 0 ) {
xml += "\n"
+""+srs+"\n"
+presence_points_xml
+"\n";
}
if ( absence_points_xml.length() > 0 ) {
xml += "\n"
+""+srs+"\n"
+absence_points_xml
+"\n";
}
xml += "\n"
+model_xml
+"\n";
if (calculate_matrix.equals("yes")) {
xml += "\n";
}
if (calculate_roc.equals("yes")) {
xml += "\n";
}
xml += "\n"
+"\n"
+"\n"; |
| call_service |
workflow |
This part is responsible for perfoming the internal test.. |
Beanshells (2)
| Name |
Description |
Inputs |
Outputs |
| make_xml |
|
calculate_matrix
calculate_roc
mask_id
layers
model_xml
presence_points_xml
threshold
num_background_points
absence_points_xml
srs
species_label
|
xml
|
| checkProgress |
|
input_progress
|
output_progress
|
Outputs (3)
| Name |
Description |
| log |
Test model log.
|
| progress |
Test model progress. Possible values are: 100 (finished), -2 (aborted) or -3 (cancelled).
|
| test_statistics |
An XML string containing details of the results of the test.
|
Datalinks (15)
| Source |
Sink |
| mask_id |
make_xml:mask_id |
| layers |
make_xml:layers |
| model_xml |
make_xml:model_xml |
| presence_points_xml |
make_xml:presence_points_xml |
| calculate_matrix |
make_xml:calculate_matrix |
| calculate_roc |
make_xml:calculate_roc |
| absence_points_xml |
make_xml:absence_points_xml |
| num_background_points |
make_xml:num_background_points |
| threshold |
make_xml:threshold |
| srs |
make_xml:srs |
| species_label |
make_xml:species_label |
| make_xml:xml |
call_service:testModel_configuration |
| call_service:output_log |
log |
| call_service:output_progress |
progress |
| call_service:test_statistics |
test_statistics |
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licensed under:
Version 2
(of 11)
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