test_model

None

if ((layers == void) || (layers == null)) {
	throw new RuntimeException("The layers parameter must be specified for model testing");
}
if ((model_xml == void) || (model_xml == null)) {
	throw new RuntimeException("The model_xml parameter must be specified for model testing");
}
if ( ((presence_points_xml == void) || (presence_points_xml == null)) && ((absence_points_xml == void) || (absence_points_xml == null)) ) {
	throw new RuntimeException("The presence_points_xml and/or absence_points_xml parameters must be specified for model testing");
}
if ((species_label == void) || (species_label == null)) {
	species_label = "undefined";
}
if ((srs == void) || (srs == null)) {
	srs = "GEOGCS[\"WGS84\", DATUM[\"WGS84\", SPHEROID[\"WGS84\", 6378137.0, 298.257223563]], PRIMEM[\"Greenwich\", 0.0], UNIT[\"degree\", 0.017453292519943295], AXIS[\"Longitude\",EAST], AXIS[\"Latitude\",NORTH]]";
}
xml = "\n"
+"\n"
+"\n"
+"\n"
+"\n";
int i = 0;
String[] s_layers = layers.split("\n");
String first_layer = "";
for ( i = 0; i < s_layers.length; ++i ) {
	if ( s_layers[i].length() > 0 ) {
		if (first_layer.length() == 0) {
			first_layer = s_layers[i];
		}
		xml += "\n";
	}
}
if ((mask_id == void) || (mask_id == null)) {
	mask_id = first_layer;
}
xml += "\n"
+"\n";
if ( presence_points_xml != void && presence_points_xml != null && presence_points_xml.length() > 0 ) {
	xml += "\n"
	+""+srs+"\n"
	+presence_points_xml
	+"\n";
}
if ( absence_points_xml != void && absence_points_xml != null && absence_points_xml.length() > 0 ) {
	xml += "\n"
	+""+srs+"\n"
	+absence_points_xml
	+"\n";
}
xml += "\n"
+model_xml
+"\n";
if (calculate_matrix.equals("yes")) {
	if ((threshold == void) || (threshold == null)) {
		throw new RuntimeException("The threshold parameter must be specified when confusion matrix is activated");
	}
	xml += "\n";
}	
if (calculate_roc.equals("yes")) {
	if ((num_background_points == void) || (num_background_points == null)) {
		num_background_points = "10000";
	}
	xml += "\n";
}	
xml += "\n"
+"\n"
+"\n";

Name	Description
model_xml	Serialized model in XML.
layers_ids	Newline separated list of layers for model testing.
presence_points_xml	Newline separated list of presence points in XML for model testing.
mask_id	Mask id used for model testing.
calculate_matrix	Indicates if confusion matrix should be calculated ("yes" or "no").
calculate_roc	Indicates if ROC curve should be calculated ("yes" or "no").
absence_points_xml	Newline separated list of absence points for model testing. Same format used for presence points.
num_background_points	Number of background points to be used when calculating ROC curve (when no absence points are provided).
threshold	Threshold to be used when calculating confusion matrix.
srs	Spatial reference system for all points in WKT format.
species_label	Species name.

Name	Description	Inputs	Outputs
make_xml		calculate_matrix calculate_roc mask_id layers model_xml presence_points_xml threshold num_background_points absence_points_xml srs species_label	xml
checkProgress		input_progress	output_progress

Name	Description
log	Test model log.
progress	Test model progress. Possible values are: 100 (finished), -2 (aborted) or -3 (cancelled).
statistics_xml	An XML string containing details of the results of the test.

Source	Sink
mask_id	make_xml:mask_id
layers_ids	make_xml:layers
model_xml	make_xml:model_xml
presence_points_xml	make_xml:presence_points_xml
calculate_matrix	make_xml:calculate_matrix
calculate_roc	make_xml:calculate_roc
absence_points_xml	make_xml:absence_points_xml
num_background_points	make_xml:num_background_points
threshold	make_xml:threshold
srs	make_xml:srs
species_label	make_xml:species_label
make_xml:xml	call_service:testModel_configuration
call_service:output_log	log
call_service:output_progress	progress
call_service:test_statistics	statistics_xml

test_model

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