Find compounds pharmacology and align against target sequences
Look up concept URI from freetext, e.g. "aspirin", find compound pharmacology and their target info. For each target, blast+tree on its sequence - if any.
Uses the Open PHACTs API https://dev.openphacts.org/docs/alpha and the myExperiment workflow 3369 "Blast_Align_and_Tree" http://www.myexperiment.org/workflows/3369.
Notice that in tihs workflow, most concepts won't have compounds, and most compounds won't have targets, and most targets won't have a sequence - Open PHACT API wise this means this workflow would be propagating 404 Not Found errors.
Until there is a Local worker to filter out Errors, the best way to view only the results is to manually select "View results" for each output port - after the workflow run has finished. Note that some of the ports have XML outputs.
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http://myexperiment.org/workflows/3860/download?version=1
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Created: 2010-12-06 | Last updated: 2013-03-28
Attributions: EBI_ClustalW2
Created: 2011-04-07 | Last updated: 2011-04-07
Credits: Hectorj2f
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