Validate_Compare_Compare_List

Created: 2013-04-15 09:45:54

Download Workflow

QA for file migrated to wav. The QA steps include File Format Validation, Significant Property Comparison and xcorrSound waveform-compare file content comparison (all CLI). Input the migrated wav and a "compare-to-wav" file.

Preview

Download as scalable diagram (SVG)

Run

Run this Workflow in the Taverna Workbench...

Option 1:

Copy and paste this link into File > 'Open workflow location...'
http://www.myexperiment.org/workflows/3521/download?version=1
[ More Info Expand ]

Workflow Components

Authors (1)

Titles (1)

Descriptions (1)

Dependencies (0)

Inputs (3)

Name	Description
comparetowav_list	Fileurl as Value with list of MP3 input files
output_files
migratedwav_list

Processors (12)

Name	Type	Description
Validate_Compare_Compare	workflow
Input_file_to_file_list	localworker	Script List split = new ArrayList(); if (!string.equals("")) { String regexString = "\n"; if (regex != void) { regexString = regex; } String[] result = string.split(regexString); for (int i = 0; i < result.length; i++) { if (!result[i].startsWith("#")) { split.add(result[i]); } } }
regex_value	stringconstant	Value \n
Read_Text_File	localworker	Script BufferedReader getReader (String fileUrl, String encoding) throws IOException { InputStreamReader reader; try { if (encoding == null) { reader = new FileReader(fileUrl); } else { reader = new InputStreamReader(new FileInputStream(fileUrl),encoding); } } catch (FileNotFoundException e) { // try a real URL instead URL url = new URL(fileUrl); if (encoding == null) { reader = new InputStreamReader (url.openStream()); } else { reader = new InputStreamReader (url.openStream(), encoding); } } return new BufferedReader(reader); } StringBuffer sb = new StringBuffer(4000); if (encoding == void) { encoding = null; } BufferedReader in = getReader(fileurl, encoding); String str; String lineEnding = System.getProperty("line.separator"); while ((str = in.readLine()) != null) { sb.append(str); sb.append(lineEnding); } in.close(); filecontents = sb.toString();
encoding_value	stringconstant	Value utf8
outputToLogs	localworker	Script if (!outputdir.endsWith("/")) { outputdir += "/"; } output = outputdir + "logs"; dirFile = new File(output); File dirFile = new File(output+"/1"); dirFile.mkdirs();
Write_Output	externaltool
Beanshell	beanshell	Script passed = passThru;
Write_Output_2	externaltool
Beanshell_2	beanshell	Script passed = passThru;
Read_Text_File_2	localworker	Script BufferedReader getReader (String fileUrl, String encoding) throws IOException { InputStreamReader reader; try { if (encoding == null) { reader = new FileReader(fileUrl); } else { reader = new InputStreamReader(new FileInputStream(fileUrl),encoding); } } catch (FileNotFoundException e) { // try a real URL instead URL url = new URL(fileUrl); if (encoding == null) { reader = new InputStreamReader (url.openStream()); } else { reader = new InputStreamReader (url.openStream(), encoding); } } return new BufferedReader(reader); } StringBuffer sb = new StringBuffer(4000); if (encoding == void) { encoding = null; } BufferedReader in = getReader(fileurl, encoding); String str; String lineEnding = System.getProperty("line.separator"); while ((str = in.readLine()) != null) { sb.append(str); sb.append(lineEnding); } in.close(); filecontents = sb.toString();
Input_file_to_file_list_2	localworker	Script List split = new ArrayList(); if (!string.equals("")) { String regexString = "\n"; if (regex != void) { regexString = regex; } String[] result = string.split(regexString); for (int i = 0; i < result.length; i++) { if (!result[i].startsWith("#")) { split.add(result[i]); } } }

Beanshells (12)

Name	Inputs	Outputs
Beanshell	passThru wait	passed
Beanshell_2	passThru wait	passed
and_2	inputvaerdier	and
ExtractFromFFprobe	ffprobe_output	duration hz channels bitsPerSample bitrate
ExtractFromFFprobe_2	ffprobe_output	duration hz channels bitsPerSample bitrate
compareBitsPerSample	first second	equals
compareHz	first second	equals
compareDuration	first second maxDiff	similar firstLong secondLong
compareChannels	first second	equals
and	inputvaerdier	and
BeanshellIfElse	nodelist	trueOut falseOut
BeanshellCopy	run filename	fileout

Outputs (1)

Name	Description
Validate_Compare_Compare_Success

Datalinks (21)

Source	Sink
Beanshell_2:passed	Validate_Compare_Compare:output_files
Input_file_to_file_list_2:split	Validate_Compare_Compare:migratedwav_inputfile
Input_file_to_file_list:split	Validate_Compare_Compare:comparetowav_inputfile
regex_value:value	Input_file_to_file_list:regex
Read_Text_File:filecontents	Input_file_to_file_list:string
comparetowav_list	Read_Text_File:fileurl
encoding_value:value	Read_Text_File:encoding
output_files	outputToLogs:outputdir
output_files	Write_Output:outputdir
Validate_Compare_Compare:Success	Write_Output:success
Input_file_to_file_list_2:split	Write_Output:wav
Write_Output:STDOUT	Beanshell:wait
Validate_Compare_Compare:Success	Beanshell:passThru
output_files	Write_Output_2:outputdir
Write_Output_2:STDOUT	Beanshell_2:wait
outputToLogs:output	Beanshell_2:passThru
migratedwav_list	Read_Text_File_2:fileurl
encoding_value:value	Read_Text_File_2:encoding
Read_Text_File_2:filecontents	Input_file_to_file_list_2:string
regex_value:value	Input_file_to_file_list_2:regex
Beanshell:passed	Validate_Compare_Compare_Success