Visualize PAV provenance as SVG

Created: 2013-03-05 23:36:36 Last updated: 2013-04-05 10:05:39

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VoID descriptions are fetched as Turtle, cleaned up to be valid OWL ontology and include useful labels, processed through the OWL reasoner Pellet; this adds inferred PROV statements to the RDF, which is then fed to the PROV Toolbox, generating an SVG visualization of the provenance.

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Download as scalable diagram (SVG)

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Workflow Components

Authors (1)

Titles (1)

Descriptions (1)

Dependencies (0)

Inputs (1)

Name	Description
voidURI	URI for a RDF Turtle file containing VoID description. Note that the input is the URI as a string (in order to get the correct @base), don't use "Set URL" button!

Processors (4)

Name	Type	Description
fetchVoid	workflow
clean	workflow
owlreason	workflow
prov2svg	workflow

Beanshells (0)

Outputs (1)

Name	Description
provSVG

Datalinks (6)

Source	Sink
voidURI	fetchVoid:turtleURI
fetchVoid:turtle	clean:unclean
fetchVoid:fetch_turtle_actualURL	clean:baseURI
clean:clean	owlreason:ttl
owlreason:reasonedRdf	prov2svg:prov
prov2svg:svg	provSVG

Coordinations (0)

Information Workflow Type

Taverna 2

Information Uploader

Stian Soiland-Reyes

Information License

All versions of this Workflow are licensed under:

Information Version 1 (earliest) (of 2)

Information Credits (1)

(People/Groups)

Stian Soiland-Reyes

Information Attributions (0)

(Workflows/Files)

None

Information Tags (9)

Uploader tags

ontology
|
owl
|
pav
|
pellet
|
prov
|
provenance
|
provtoolbox
|
rdf
|
svg

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Information Featured In Packs (1)

Visualize PAV provenance as SVG

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Information Attributed By (0)

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Information Favourited By (0)

No one

Information Statistics

2661 viewings

1399 downloads

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Citations (0)

None

Version History

In chronological order:

Visualize PAV provenance as SVG

Created by Stian Soiland-Reyes on Tuesday 05 March 2013 23:36:36 (UTC)
Visualize PAV provenance as SVG

Created by Stian Soiland-Reyes on Friday 05 April 2013 09:11:36 (UTC)

Revision comment:

Updated to use PROVToolbox 0.1.3

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Stian Soiland-Reyes	Friday 05 April 2013 08:23:27 (UTC)
	Note that this workflow does not work on Windows as it uses command line tools like wget and unzip.

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