Non-redundant protein alignments

Execute BLASTP program to search protein databases using a protein query: Input file from iPlant Discovery Environment

Save the data extract of similar sequences created by BLASTP Execute XMKNR to a compute a non-redundant set from a large collection of protein sequences. Input from the data extract created by BLASTP.

Perform multiple sequence alignments using Clustal Omega and TCoffee Input from data extract created by XMKNR

To execute this workflow, you need to be logged into the BioExtract Server using your iPlant credentials. BLASTP uses as input, a file from your iPlant discovery environment named AEE32289_data. This may be changed.