galaxy_101

Created: 2012-06-13 08:06:59 Last updated: 2012-06-14 02:52:29

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This is a Galaxy pipeline written using the Galaxy 101 tutorial (https://main.g2.bx.psu.edu/galaxy101). The pipeline involves retrieving genome and SNP data from UCSC for a particular chromosome. These data are integrated in order to find exons with the highest number of SNPs.

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Workflow Components

Inputs (2)

Name	Description
Exons
Features

Steps (6)

Name	Tool	Description
Input dataset	None
Input dataset	None
Join	gops_join_1
Group	Grouping1
Sort	sort1
Select first	Show beginning1

Outputs (4)

Name	Type
output	interval
out_file1	tabular
out_file1	input
out_file1	input

Information Workflow Type

Galaxy

Information Uploader

Peter Li

Information License

All versions of this Workflow are licensed under:

Information Version 2 (latest) (of 2)

Information Credits (1)

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Peter Li

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Information Statistics

1646 viewings

772 downloads

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Version History

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galaxy_101

Created by Peter Li on Wednesday 13 June 2012 08:06:59 (UTC)

Last edited by Peter Li on Thursday 14 June 2012 02:43:06 (UTC)
galaxy_101

Created by Peter Li on Thursday 14 June 2012 02:51:22 (UTC)

Last edited by Peter Li on Thursday 14 June 2012 02:52:29 (UTC)

Revision comment:

Cleaned up some redundant steps at the end of this Galaxy pipeline.

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