User: Giovanni Dall'Olio

Name: Giovanni Dall'Olio

Joined: Friday 27 July 2007 11:27:57 (UTC)

Last seen: Sunday 05 February 2017 17:04:34 (UTC)

Email (public): Not specified

Website: http://bioinfoblog.it

Location: Barcelona (Spain), Italy

5 Friends

1 Group (admin)

0 Groups (member)

1 Files

2 Workflows

1 Favourite

Giovanni Dall'Olio has been credited 3 times

Giovanni Dall'Olio has an average rating of:

0.0 / 5

(0 ratings in total)

for their items

phd student at the Pompeu Fabra University of Barcelona.

Master Degree in Bioinformatics at the Alma Mater Studiorum University of Bologna (cheers to all my former schoolmates ! )

Other contact details:

Not specified

Interests:

lot of things :)

Field/Industry: population genetics, bioinformatics

Occupation/Role(s): phd student

Organisation(s):

upf

Note: some items may not be visible to you, due to viewing permissions.

Contents (click to expand/contract)

Taverna 1

Uploader

Giovanni Dall'Olio

Basic eSearch/eFetch cycle (1)

Download

This is a basic eSearch/eFetch workflow created with taverna and using eUtils from NCBI. It accepts a query term as input (at the moment, for testing purposes, this is a fixed string), interrogate eSearch to retrieve the list of related sequences on the Nucleotide database, and use eFetch to retrieve the corresponding sequences. I wrote this workflow one year ago, when I was trying to understand how taverna and eUtils work; I suspect it broken, and of course it could be enhanced, so I am ...

Created: 2008-12-04 | Last updated: 2008-12-04

Credits: Giovanni Dall'Olio

Makefile

Uploader

Giovanni Dall'Olio

Sample makefile workflow (1)

Download

A sample makefile workflow. Type 'make help' to print an help message. Nothing else is supported in this version. Interesting links about makefiles in bioinformatics: http://www.nodalpoint.org/2007/03/18/a_pipeline_is_a_makefile http://swc.scipy.org/lec/build.html

Created: 2008-10-30 | Last updated: 2008-10-30

Credits: Giovanni Dall'Olio

What is this?

Linked Data

Non-Information Resource URI:

Alternative Formats