User: Kalpana

Name: Kalpana

Joined: Friday 11 September 2009 20:35:29 (UTC)

Last seen: Sunday 27 March 2011 21:13:36 (UTC)

Email (public): Not specified

Website: Not specified

Location: Not specified

0 Friends

0 Groups (admin)

0 Groups (member)

3 Workflows

0 Favourites

Kalpana has been credited 3 times

Kalpana has an average rating of:

0.0 / 5

(0 ratings in total)

for their items

Description/summary not set

Other contact details:

Not specified

Interests:

Not specified

Field/Industry: Not specified

Occupation/Role(s): Not specified

Organisation(s):

Not specified

Note: some items may not be visible to you, due to viewing permissions.

Contents (click to expand/contract)

BioExtract Server

Uploader

Kalpana

Gene function prediction in Macaca Fasciculus (1)

Download

This workflow searches for ORF regions in a specific gene (TOM1L1 in Macaca fasciculus testis) to predict candidate protein coding regions. Results from blastp are used to find which frames are closest to existing proteins in other species. rpsblast is used to predict the domains and the protein families that these sequences may belong to. This is used to predict the function of the protein.

Created: 2011-03-27 | Last updated: 2011-03-27

Credits: Kalpana

BioExtract Server

Uploader

Kalpana

Blastn-ClustalW (1)

Download

This workflow retrieves a sequence from NCBI Core Nucleotide, searches for similar sequences with Blastn, then feeds a set of Blastn results into the multiple alignment tool, ClustalW.

Created: 2010-10-27 | Last updated: 2010-10-27

Credits: Kalpana

BioExtract Server

Uploader

Kalpana

Blastn-ClustalW (1)

Download

This workflow retrieves a sequence from NCBI Core Nucleotide, searches for similar sequences with Blastn, then feeds a set of Blastn results into the multiple alignment tool, ClustalW.

Created: 2010-09-29

Credits: Kalpana

What is this?

Linked Data

Non-Information Resource URI:

Alternative Formats