Note: some items may not be visible to you, due to viewing permissions.
Contents (click to expand/contract)
Get Element ID from Gzipped GenBank file
(1)
This workflow gunzips a *.gbk.gz file, converts it to XML (via agavewriter) and finds the Element ID.
Does not work on *.gz files larger than 10MB.
I upped the JVM settings on Taverna to:
<key>VMOptions</key>
<string>-Xmx4096m -XX:MaxPermSize=1024m</string>
Created my own agave.dtd to get the XPath service to work the XML file generated from the Read_GenBank_File service. You will need to ...
Created: 2011-10-06
| Last updated: 2011-10-06
Credits:
Mutanthumb
Alan Williams
Kepler Comic
(1)
This Kepler workflow displays an image when a URL is supplied.
Based on DisplayImage by Matt Jones
Created: 2011-09-28
| Last updated: 2011-09-28
Credits:
Mutanthumb
Absolute Value
(1)
This Kepler workflow does this basic calculation:
3 + 5 */ 3 + - 5 then take the absolute value of the whole mess
Based on BasicAddition by Matt Jones
Created: 2011-09-28
| Last updated: 2011-09-28
Credits:
Mutanthumb
Hello Hipster
(1)
This is a Kepler workflow which modifies the usual Hello World to show LoremHipster text instead.
Based on "Hello World" by Matt Jones
Created: 2011-09-28
| Last updated: 2011-09-28
Credits:
Mutanthumb
Ag Spreadsheet Import
(1)
Based on Spreadsheet Import Example by David WithersSusan
Example using the SpreadsheetImport service to import data from an Excel spreadsheet.
The workflow imports the file spreadsheet file WaterUse.xlsx and generates a graph from the date.
The source data is from http://data.gov.uk/
Created: 2011-09-21
| Last updated: 2011-09-21
Credits:
Mutanthumb
Alan Williams
Nested Mean Rshell
(1)
This workflow uses a nested workflow. The nested workflow takes a list of values and finds the mean and standard deviation for each list. The result of the nested workflow is then concatenated with a list of names using Dot Product for list handling.
Created: 2011-09-21
| Last updated: 2011-09-21
Credits:
Mutanthumb
Mean Rshell
(1)
Used the Rshell to find the MEAN and standard deviation of a list of values.
Created: 2011-09-21
| Last updated: 2011-09-21
Credits:
Mutanthumb
New Population Histogram
(1)
This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population
Based on Population histogram in R by
Alan R Williams
Created: 2011-09-21
| Last updated: 2011-09-21
Credits:
Mutanthumb
ZipCodeGetWeatherInfo
(1)
Gives the 7 day weather forecast by Zip Code
Info display: wind, visibility, temperature, sky conditions and pressure.
Based on "Get Weather Info" by Franck Tanoh
Created: 2011-09-13
| Last updated: 2011-09-13
Credits:
Mutanthumb
Get My Weather
(1)
Gets a variety weather info for "Cleveland" and "Indianapolis"
Based on "Get weather information" by Franck Tanoh
Created: 2011-09-13
| Last updated: 2011-09-13
Credits:
Mutanthumb
Get Recent Cards From Indexed
(1)
This gets the jpgs from the "This is Indexed" URL: http://thisisindexed.com/page/2/ using the regular expression .*/uploads/*. pull everything in the "uploads" directory.
Based on "Fetch today's xkcd comic" by Tom Oinn, Stian Soiland-Reyes
Use the local java plugins and some filtering operations to fetch the comic strip image from http://xkcd.com/
Created: 2011-09-13
| Last updated: 2011-09-13