myExperiment

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David De Roure

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Four quadrant diagram

Created: 2014-11-05 23:58:21 | Last updated: 2014-11-06 00:37:54

Credits: David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Powerpoint file for Figure 1. This figure is based on an earlier diagram by Dave Robertson of University of Edinburgh which appeared in the EPSRC grant proposal EP/J017728/1 SOCIAM: The Theory and Practice of Social Machines

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David De Roure

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The Future of Scholarly Communications UKSG fulltext...

Created: 2014-11-05 23:50:39 | Last updated: 2014-11-05 23:59:51

Credits: David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

De Roure, D, The future of scholarly communications, Insights, 2014, 27(3), 233–238; DOI: http://dx.doi.org/10.1629/2048-7754.171 Please acknowledge Insights: the UKSG journal as the place of first publication.

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Igor Lutsenko

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Deploed model of extremal system operation for solvi...

Created: 2014-10-27 21:01:16 | Last updated: 2015-05-13 05:46:35

Credits: Igor Lutsenko

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The reduced, simplified registration mathematical model of the system operation, obtained by scaling the registration signals of the basic model and determining the sum of the reduced, integrated flow rates by the input and output of the system under study was constructed. The studies of this traditional, for today model have shown the problem, associated with the existing approach in operations identification. As a result of using the agent model and system approach, it was found that regist...

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Marco Roos

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Concept Profile of phenotype Chorea

Created: 2014-10-20 08:34:10

Credits: Marco Roos BioSemantics

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Concept Profile generated from HPO term 'Chorea' via mapping to the corresponding UMLS phenotype concept.The profile contains ranked associations with Chorea conform mutual information content derived from co-occurrence in MedLine abstracts.Versions:HPO-UMLS mapping: Winnenburg, R., & Bodenreider, O. (2014). Coverage of Phenotypes in Standard Terminologies. In Proceedings of the ISMB’2014 SIG meeting “BioLINK.” Retrieved from http://phenoday2014.bio-lark.org/pdf/...

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Marco Roos

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HTT-HPO concept profile match result

Created: 2014-10-20 08:26:32 | Last updated: 2014-10-20 08:35:28

Credits: Marco Roos Rajireturn BioSemantics

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Example Concept Profile of the Human Phenotype named 'Chorea' also referred to by as Human Phenotype Ontology concept HP_0002072.This file contains a list of concepts from the Human Phenotype Ontology, ranked according to Concept Profile Matching with the profile of huntingtin, the protein whose aberrant form is the cause of Huntington's Disease.Versions:HPO-UMLS mapping: Winnenburg, R., & Bodenreider, O. (2014). Coverage of Phenotypes in Standard Terminologies. In Proceedings...

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Alan Williams

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XPath service

Created: 2014-10-03 15:36:07

Credits: myGrid

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A PDF file containing a presentation on how to use the XPath service in Taverna

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Alan Williams

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WoRMS and OBIS services

Created: 2014-10-03 15:35:11

Credits: myGrid

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A PDF file containing a presentation on how to use WoRMS and OBIS services in Taverna

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Alan Williams

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Working with BioVeL Portal

Created: 2014-10-03 15:34:08

Credits: myGrid

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A PDF file containing a presentation on how to work with the BioVeL portal

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Alan Williams

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Using R in Taverna

Created: 2014-10-03 15:33:06

Credits: myGrid

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A PDF file containing a presentation on how to use R in Taverna

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Alan Williams

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Tool service

Created: 2014-10-03 15:32:14

Credits: myGrid

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A PDF file containing a description of how to use the tool service in Taverna

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Alan Williams

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Using BiodiversityCatalogue

Created: 2014-10-03 15:31:21

Credits: myGrid

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A PDF file containing a presentation on how to use BiodiversityCatalogue

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Alan Williams

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Taverna introduction

Created: 2014-10-03 15:29:44

Credits: myGrid

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A PDF file containing a presentation introducing Taverna

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Alan Williams

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Simple workflow

Created: 2014-10-03 15:28:51

Credits: myGrid

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A PDF file containing a presentation about creating a simple workflow in Taverna

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Alan Williams

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Nested workflows

Created: 2014-10-03 15:27:58

Credits: myGrid

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A PDF file containing a presentation about nested workflows within Taverna

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Alan Williams

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Introduction to myGrid

Created: 2014-10-03 15:27:06

Credits: myGrid

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A PDF file containing a presentation introducing myGrid

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Alan Williams

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Installing Taverna

Created: 2014-10-03 15:26:12

Credits: myGrid

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A PDF file containing a presentation on how to install Taverna

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Alan Williams

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Inputting data

Created: 2014-10-03 15:25:25

Credits: myGrid

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A PDF file containing a presentation on how to input data into Taverna workbench

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Alan Williams

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help

Created: 2014-10-03 15:24:36

Credits: myGrid

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A PDF file containing help information for Taverna Biodiversity

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Alan Williams

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Embedding workflows in your website

Created: 2014-10-03 15:23:49

Credits: myGrid

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A PDF file containing a presentation about how to embed the running of workflows in your website, and examples.

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Alan Williams

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Components

Created: 2014-10-03 15:22:22

Credits: myGrid

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A PDF file containing a presentation about Taverna components

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Alan Williams

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Checking Taverna installation

Created: 2014-10-03 15:21:35

Credits: myGrid

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A PDF file containing a presentation on how to check your Taverna installation

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Alan Williams

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Advanced Taverna

Created: 2014-10-03 15:20:26

Credits: myGrid

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A PDF file that contains a presentation about Advanced Taverna features

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Alan Williams

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forester_1037.jar

Created: 2014-10-03 11:27:41 | Last updated: 2014-10-03 12:33:14

License: GNU Lesser General Public License (LGPL) 2.1

forester is a collection of open source libraries of Java software for phylogenomics and evolutionary biology research. For example, the tree viewer Archaeopteryx is based on forester. The forester website is at https://sites.google.com/site/cmzmasek/home/software/foresterThe current developer version is available through Google code at: http://code.google.com/p/forester/Author: Christian Zmasek, Sanford-Burnham Medical Research Instituteforester is Cop...

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