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BiomartAndEMBOSSMouseRat (1)

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This workflow retrieves all genes on human chromosome 22 that are associated with a disease and aligns the upstream regions of the mouse and rat homologues. The alignments are plotted and corresponding sequence ids are also returned.

Created: 2012-04-05

Credits: Alan Williams

BiomartAndEMBOSSMouseRat (1)

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This workflow retrieves all genes on human chromosome 22 that are associated with a disease and aligns the upstream regions of the mouse and rat homologues. The alignments are plotted and corresponding sequence ids are also returned.

Created: 2012-04-05

Credits: Katy Wolstencroft

Get Pathway-Genes and gene description by ... (2)

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Given a specific entrez gene id, returns the pathways that this gene participates in and for each of those pathways which genes (including their description) are associated with.

Created: 2012-03-27 | Last updated: 2012-04-03

Credits: Eleni

Format_transform_RMonto-RSextension (1)

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This workflow provides transformation of an item description attribute set from RMonto operator into a format required by attribute based k-NN operators of the Recommender extension.

Created: 2012-03-26

DemoWorkflow (1)

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 Demo Workflow

Created: 2012-03-22 | Last updated: 2012-03-22

Credits: Jribault

(Updated)Retrieve sequence in EMBL format. (1)

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This workflow retrieves a sequence associated with its features in embl format.

Created: 2012-03-19 | Last updated: 2012-04-02

Credits: Ankit upadhyay

Available instruments through DPAS which a... (1)

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This workflow uses a DPAS servlet to obtain all available intrument keys in the DPAS (Data Provider Access Service) and formats the return as VOTable.

Created: 2012-03-16 | Last updated: 2012-03-16

Credits: Anja Le Blanc

Attributions: Available instruments through DPAS Split VOTable into its values

Example of Execute_SQL_Query with parameters (1)

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This workflow connects to a mysql on localhost, queries the "world" database which is one of the test databases on MySQL 5.5, queries it about which countries have Dutch as a language, and emits answers in both Lists and in xml. This workflow is intended as an example to help you see the syntax for the various inputs to this local service beanshell. see: http://www.mygrid.org.uk/dev/wiki/display/taverna/Execute+SQL+Query for instructions on jars, dependencies etc. The jar used he...

Created: 2012-03-16 | Last updated: 2012-03-16

Credits: Helen Hulme

localhost Tesseract-Ocrad comparison (3)

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Simple demo workflow, for use with a standalone (localhost) version of the DAE platform. Compares Tesseract and Ocrad OCR results. For demonstration reasons and ease of use, this workflow has hardcoded username/password values. This is, obviously, very bad, but since it relates only to a sandboxed virtual server, potential damage is null.

Created: 2012-03-16 | Last updated: 2012-05-16

Credits: Bart Lamiroy

Simple Tesseract-Ocrad comparison (1)

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Simple demonstration workflow for use with the on-line Lehigh-based DAE server, comparing the results of Tesseract and Ocrad OCR engines on a specific document image.

Created: 2012-03-16 | Last updated: 2012-03-16

Credits: Bart Lamiroy