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3791?size=60x60 Gb David De Roure
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Blob Four quadrant diagram

Created: 2014-11-05 23:58:21 | Last updated: 2014-11-06 00:37:54

Credits: User David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Powerpoint file for Figure 1.  This figure is based on an earlier diagram by Dave Robertson of University of Edinburgh which appeared in the EPSRC grant proposal EP/J017728/1 SOCIAM: The Theory and Practice of Social Machines

File type: PowerPoint 2007 presentation

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3791?size=60x60 Gb David De Roure
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Blob The Future of Scholarly Communications UKSG fulltext...

Created: 2014-11-05 23:50:39 | Last updated: 2014-11-05 23:59:51

Credits: User David De Roure

License: Creative Commons Attribution-Share Alike 3.0 Unported License

De Roure, D, The future of scholarly communications, Insights, 2014, 27(3), 233–238; DOI: http://dx.doi.org/10.1629/2048-7754.171 Please acknowledge Insights: the UKSG journal as the place of first publication. 

File type: Adobe PDF

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3791?size=60x60 Gb David De Roure
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Pack The Future of Scholarly Communications


Created: 2014-11-05 23:43:27 | Last updated: 2014-11-06 00:38:53

Original materials for article "The Future of Scholarly Communications" in Insights: the UKSG journal, based on a paper presented at the 37th UKSG Conference, Harrogate, April 2014.Citation - Please acknowledge Insights: the UKSG journal as the place of first publication.De Roure, D, The future of scholarly communications, Insights, 2014, 27(3), 233–238; DOI: http://dx.doi.org/10.1629/2048-7754.171AuthorDavid De RoureProfessor of e-Research, University of O...

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Taverna 2
Uploader
4080?size=60x60 Renato De Giovanni
Project Biovel

Workflow convert_points_xml_to_csv (4)

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Converts points in openModeller XML format into CSV format (header: occurrenceID,nameComplete,decimalLongitude,decimalLatitude). Most input/output ports related with presence or absence points expect/return data in openModeller XML format. This component can be used to simply convert such data back to a more human friendly format.

Created: 2014-11-05 | Last updated: 2015-05-11

Credits: Network-member BioVeL

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Avatar Ch Christine Chichester
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Pack Open PHACTS Drug Discovery FAQ Workflows


Created: 2014-11-05 11:12:18 | Last updated: 2014-11-05 11:15:59

Computational drug discovery using the KNIME workflow engine and the integrated resources of Open PHACTS for answering a number of important frequently asked pharmacology questions. 14 workflows for answering 16 different questions.

14 items in this pack

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4260?size=60x60 Ua Igor Lutsenko
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Blob Deploed model of extremal system operation for solvi...

Created: 2014-10-27 21:01:16 | Last updated: 2015-05-13 05:46:35

Credits: User Igor Lutsenko

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The reduced, simplified registration mathematical model of the system operation, obtained by scaling the registration signals of the basic model and determining the sum of the reduced, integrated flow rates by the input and output of the system under study was constructed. The studies of this traditional, for today model have shown the problem, associated with the existing approach in operations identification. As a result of using the agent model and system approach, it was found that regist...

File type: Adobe PDF

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4260?size=60x60 Ua Igor Lutsenko

Workflow Fundamentals of the theory of efficiency (1)

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The study expanded the target operation efficiency has allowed to derive a formula that can be used as the sole criterion of optimal control.

Created: 2014-10-27

Credits: User Igor Lutsenko

KNIME
Uploader
Avatar Ch Christine Chichester

Workflow Q4: For a given interaction profile, give ... (1)

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In the Open PHACTS project, we have developed KNIME utility nodes that can be set to automatically leverage the desired content from Open PHACTS web services and simplify the construction of workflow processes.  In this workflow we use the these KNIME nodes (which can be down loaded here: https://github.com/openphacts/OPS-Knime ) with the Open PHACTS API call Compound Information followed by Compound Information (Batch) followed by Chemical Structure Search: Similarity with filter search...

Created: 2014-10-22

Credits: User Christine Chichester User Daniela Digles Network-member Open PHACTS

KNIME
Uploader
Avatar Ch Christine Chichester

Workflow Q19: For the targets in a given pathway, r... (1)

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In the Open PHACTS project, we have developed KNIME utility nodes that can be set to automatically leverage the desired content from Open PHACTS web services and simplify the construction of workflow processes.  In this workflow we use the these KNIME nodes (which can be down loaded here: https://github.com/openphacts/OPS-Knime ) with the Open PHACTS API call Pathway Information: Get Targets followed by Target Pharmacology with filter minEx-pChembl=5 to answer scientific competency quest...

Created: 2014-10-22

Credits: User Christine Chichester User Daniela Digles Network-member Open PHACTS

KNIME
Uploader
Avatar Ch Christine Chichester

Workflow Q18:For pathway X, find compounds that ago... (1)

Thumb
In the Open PHACTS project, we have developed KNIME utility nodes that can be set to automatically leverage the desired content from Open PHACTS web services and simplify the construction of workflow processes.  In this workflow we use the these KNIME nodes (which can be down loaded here: https://github.com/openphacts/OPS-Knime ) with the Open PHACTS API call Pathway Information: Get Targets followed byTarget Pharmacology with filters activity_type=Potency, max-activity_value=1000, activ...

Created: 2014-10-22

Credits: User Christine Chichester User Daniela Digles Network-member Open PHACTS

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