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RapidMiner

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N Bijlani

North - Chapter 11 process (1)

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Testing myExperiment.org

Created: 2015-02-11

RapidMiner

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Jml

Store Receipts to structured information (1)

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As the title suggests, this process is a tool to transform receipts into a table sheet. The process is made for receipts that are already scanned and processed with an OCR Tool.Input: txt. FilesOutput: table with the following columns: Date, price, category, receipt index, buyer, product description Roughly speaking this process is divided in the following steps:1. .txt2exset: In this sub process a receipt.txt file is segmented. Every line represents one example. ...

Created: 2015-02-08 | Last updated: 2015-02-08

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David De Roure

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TEI materiality text alignment for Now art thou soci...

Created: 2015-02-01 14:43:21 | Last updated: 2015-02-01 15:26:30

“now art thou sociable…now art thou what thou art”: Surfacing TEI Encoding in the Bodleian First Folio’s The Tragedy of Romeo and IulietPip Willcox and David De RoureAbstractThe Bodleian First Folio project has created digital editions of the 906 pages of text from this first edition of Shakespeare’s plays. The editions are transcribed and encoded in TEI P5-conformant XML. The Bodleian First Folio’s Web interface gives the reader access to digital images o...

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Galaxy

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Björn Grüning

Galaxy workflow for the identification of ... (1)

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This approach screens two proteins against all nucleotide sequence from the NCBI nt database within hours on our cluster, leading to all organisms with an inter- esting gene structure for further investigation. As usual in Galaxy workflows every parameter, including the proximity distance, can be changed and additional steps can be easily added. For example additional filtering to refine the initial BLAST hits, or inclusion of a third query sequence.https://github.com/bgruening/galaxytools/tr...

Created: 2015-01-25

Credits: Björn Grüning

Bioclipse Scripting Language

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Egon Willighagen

Example SPARQL on Wikidata using the Linke... (1)

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This Bioclipse script (in Groovy) uses the Linked Data Fragments (ldf) manager that uses the LDF Java client library to run a SPARQL query on the LDF server wrapping Wikidata.

Created: 2015-01-23 | Last updated: 2015-01-23

Credits: Egon Willighagen

Bioclipse Scripting Language

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Egon Willighagen

Groovy script to convert (part of) CGN dat... (1)

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Converts CGN data from [0] to RDF. It uses intermedia TSV files (never mind the file extensions) for the data tab. The 3char ISO country codes are available at [1], but ideally these are pulled out of Wikidata directly. The RDF uses the Darwin Core ontology, QUDT, and Wikidata (on top of regular stuff). This Groovy script uses Bioclipse (www.bioclipse.net) with the RDF plugin.Menting, Frank (2015): CGN tomato passport data. figshare. http://dx.doi.org/10.608...

Created: 2015-01-22

Credits: Egon Willighagen

Taverna 2

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Magnus Palmblad

connect to WoS Web services lite concept (1)

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This workflow is a concept for how Taverna could connect to the Thomson Reuters Web of Science (WoS) Web services lite. However, at this moment (2015-01-20), the authentication generate a session ID, but the other services (here search and closeSession) do not have an input port for this session ID. According to the documentation, this is required. The error message from the Web service also show this is missing. This workflow is "work in progress", but may nevertheless be of interest to an...