myExperiment - Content

Taverna 2

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Eleni

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Pupose: The workflow returns a list of all Concept Set IDs currently available in the database. The Concept Sets have an hierarchical structure that can be inferred by referring to the parent Concept Set ID.

Created: 2015-04-03

Credits: Eleni BioSemantics

Taverna 2

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Eleni

Explain score between two concepts (1)

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Purpose of workflow: This workflow takes two ids as input and returns the top ranking "B" concepts according to Swanson's ABC model of discovery, where the relationships AB and BC are known and reported in the literature, and the implicit relationship AC is a putative new discovery. It might also be the case that AC is already known. In that case AC does not represent a new discovery but will still be returned (see workflow example values). The B concepts are returned sorted on the percentage...

Created: 2015-04-03

Credits: Eleni BioSemantics

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Alan Williams

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Multiple selection

Created: 2015-03-31 11:23:55 | Last updated: 2015-03-31 11:37:25

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

An interaction page that allows multiple selections from a list of values.There is a single input port of depth one called selectionValuesThere is a single output port of depth one called answers

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Richard Marchese Robinson

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myExperiment.test

Created: 2015-03-20 19:45:13 | Last updated: 2015-03-20 20:15:02

Credits: Richard Marchese Robinson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This has no value other than allowing me to test myExperiment.org functionality!

File type: ZIP archive

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Galaxy

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Björn Grüning

Galaxy workflow for the identification of ... (1)

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This approach screens three proteins against a given genome sequence, leading to a genome position were all three genes are located nearby. As usual in Galaxy workflows every parameter, including the proximity distance, can be changed and additional steps can be easily added. For example additional filtering to refine the initial BLAST hits, or inclusion of a third query sequence.https://github.com/bgruening/galaxytools/tree/master/workflows/ncbi_blast_plus/find_three_genes_located_nearby

Created: 2015-03-17

Credits: Björn Grüning

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HARESCHANDRA JAYANETHTHI

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A Preliminary Study of Ichthyofauna of Kukulugala Fo...

Created: 2015-03-04 15:02:07 | Last updated: 2015-03-04 15:03:52

Credits: HARESCHANDRA JAYANETHTHI

License: Creative Commons Attribution-Share Alike 3.0 Unported License

the report discuss about Ichthyofauna diversity of Kukulugala rain forest patch

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HARESCHANDRA JAYANETHTHI

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A new record of endangered Jonklaas Loach Lepidoceph...

Created: 2015-03-04 14:57:16

Credits: HARESCHANDRA JAYANETHTHI

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Loaches are small fishes that adapted for bottom dwelling life. The bodies are sub-cylindrical with flattened ventral aspect. They all belong to family Cobitidae of super family Cobitoidea (Loaches) under the Order Cypriniformes. They have a sub-orbital spine on their cheeks below the eyes. The body is covered with minute cycloid scales and they possess three or more pairs of short barbels (Nelson, 1976). They do not have air bladder as they always settle ...

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HARESCHANDRA JAYANETHTHI

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SOME OBSERVATIONS OF Cnemaspis podihuna DERANIYAGALA...

Created: 2015-03-04 14:50:51

Credits: HARESCHANDRA JAYANETHTHI

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The dwarf day gecko Cnemaspis podihuna is the smallest gecko recorded in Sri Lanka, and it is considered endemic to the island. According to the IUCN (International Union for Conservation of Nature) Red List it is an endangered species. This small gecko has been previously recorded from fourteen areas of dry mixed forest and wet forest.here we record this species from new localities: Buddhangala, Geelone, Malayadikanda, and Nilgala. The information avai...

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HARESCHANDRA JAYANETHTHI

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SOME OBSERVATIONS OF NESTING BEHAVIOR OF RUFOUS-BELL...

Created: 2015-03-04 14:47:35

Credits: HARESCHANDRA JAYANETHTHI

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This eagle’s nest building was observed while the author was walking halfway through the mountain passing a Dothaluya tea plantation at around 9 in the morningThe rufous-bellied eagle’s characteristic behaviour was observed at Sabaragamuwa Province in Gamthuna village in Kegalla District. Located close to Kegalle City limits, the village consists of three sub-villages. Udugama is the village at the highest point, in the middle is Medagama an...

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Taverna 2

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Eelke van der Horst

Get concept suggestions from term (1)

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This workflow suggests concept ids that match the query term. The user can run this workflow with any term of interest as for example "human", "htt", "Transcription" etc, and will get suggestions for concept ids together with descriptions. Then can choose the concept id that matches the best to her/his needs and use it to the rest of the CPA workflows.

Created: 2015-02-18

Credits: Eelke van der Horst Kristina Hettne Marco Roos Eleni

Attributions: Get concept suggestions from term

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