Rafael C. Jimenez's Workflows

Search filter terms
Filter by type
Filter by tag
Filter by licence
Filter by group
Filter by wsdl
Results per page:
Sort by:
Showing 35 results. Use the filters on the left and the search box below to refine the results.

Workflow Molecular Interactions from IntAct PSICQUI... (2)

Thumb
Get molecular interaction data in psi-mitab25 from IntAct through its REST PSICQUIC service. As input you can use an Uniprot Acc like "P99999" or a MIQL query like "alias:KHDRBS1".

Created: 2011-05-29 | Last updated: 2011-10-05

Credits: User Rafael C. Jimenez

Workflow EBI PICR, find cross-references for protei... (2)

Thumb
Find cross-references (based on 100% sequence identity) for protein accessions from more than 95 distinct databases. For instance input a list of IPI accessions and find cross-references for Swissprot and Ensembl. Mappings can be limited by source database, taxonomic ID and activity status.

Created: 2011-05-18 | Last updated: 2011-05-29

Credits: User Rafael C. Jimenez

Workflow Molecular Interactions from IntAct PSICQUI... (2)

Thumb
Get molecular interaction data in psi-mitab25 from IntAct through its PSICQUIC service. As input you can use an Uniprot Acc like "P99999" or a MIQL query like "alias:(KHDRBS1 OR HCK)". This workflow finds by itself how many queries needs to make (SOAP service limited to 200 binary interactions per call) to be able to return all the results in one file.

Created: 2011-05-17 | Last updated: 2011-07-20

Credits: User Rafael C. Jimenez

Workflow Select redundant accessions (1)

Thumb
Simple workflows to select accessions which appear more than once. Chose threshold to specify how many times an accession has to appear to be selected. This workflow uses a list of Comma-separated values as input. The accessions selected is the result which is presented in a String of Comma-separated values.

Created: 2011-01-31 | Last updated: 2011-01-31

Credits: User Rafael C. Jimenez

Workflow Define one query and retrieve Molecular In... (3)

Thumb
Define one query and retrieve Molecular Interactions from PSICQUIC Services registered in the PSICQUIC registry.

Created: 2011-01-31 | Last updated: 2013-07-10

Credits: User Rafael C. Jimenez

Results per page:
Sort by: