Define one query and retrieve Molecular Interactions from PSICQUIC Services registered in the PSICQUIC registry.

None

List filtered_url_list = new ArrayList();
List filtered_name_list = new ArrayList();

for(Object selectedService:selectedServices){
	String serviceName = ((String)selectedService).replaceAll(" ", "");
	if(serviceName.equalsIgnoreCase("all")){
		filtered_url_list = url_list;
		filtered_name_list = name_list;
		break;	
	}
	for(int i=0; i

Name	Description
format	xml25 (PSI-MIXML 2.5) tab25 (PSI-MITAB 2.5) count (Just the total count)
firstResult	Integer value that defines the first element to be shown. If the whole result set contains 100 interactions and we use firstResult=40, the first row to be returned will be the 40
maxResults	Integer value that defines the maximum number of interactions to be returned. For instance, a value of maxResults=20 will limit the results to 20 interactions.
MIQL_query	The Molecular Interactions Query Language (MIQL) defines a way to allow more powerful and flexible queries by using a specific syntax when doing searches. More information about MIQL in ... http://code.google.com/p/psicquic/wiki/MiqlReference
selectedServices	Set the list of Services you would like to query using comma-separated values. For instance: "IntAct, BioGrid, DIP, MINT". If you want to query all the PSICQUIC Services available in the Registry type the word "all". The names of the PSICQUIC Services available can be found in ... http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=ACTIVE

Name	Type	Description
Get_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URL	workflow
List_of_PSICQUIC_services__names_and_URLs_	workflow
action_value	stringconstant	Value ACTIVE
filterServicesByName	beanshell	Script List filtered_url_list = new ArrayList(); List filtered_name_list = new ArrayList(); for(Object selectedService:selectedServices){ String serviceName = ((String)selectedService).replaceAll(" ", ""); if(serviceName.equalsIgnoreCase("all")){ filtered_url_list = url_list; filtered_name_list = name_list; break; } for(int i=0; i
Split_string_into_string_list_by_regular_expression	localworker	Script List split = new ArrayList(); if (!string.equals("")) { String regexString = ","; if (regex != void) { regexString = regex; } String[] result = string.split(regexString); for (int i = 0; i < result.length; i++) { split.add(result[i]); } }
regex_value	stringconstant	Value ,
Get_Molecular_Interactions_from_a_PSICQUIC_Service_2	workflow

Name	Inputs	Outputs
filterServicesByName	name_list url_list selectedServices	filtered_url_list filtered_name_list
soapToRest	soapUrl soapSuffix restSuffix	restUrl
getNamesAndURLs	listOfServices	url_list name_list

Name	Description
psicquicUrl
MolecularInteractions
serviceName

Source	Sink
filterServicesByName:filtered_url_list	Get_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URL:soapUrl
action_value:value	List_of_PSICQUIC_services__names_and_URLs_:action
List_of_PSICQUIC_services__names_and_URLs_:url_list	filterServicesByName:url_list
List_of_PSICQUIC_services__names_and_URLs_:name_list	filterServicesByName:name_list
Split_string_into_string_list_by_regular_expression:split	filterServicesByName:selectedServices
selectedServices	Split_string_into_string_list_by_regular_expression:string
regex_value:value	Split_string_into_string_list_by_regular_expression:regex
format	Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:format
MIQL_query	Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:MIQL_query
maxResults	Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:maxResults
firstResult	Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:firstResult
Get_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URL:restUrl	Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:serviceRestUrl
Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:psicquicUrl	psicquicUrl
Get_Molecular_Interactions_from_a_PSICQUIC_Service_2:MolecularInteractions	MolecularInteractions
filterServicesByName:filtered_name_list	serviceName

Define one query and retrieve Molecular Interactions from PSICQUIC Services registered in the PSICQUIC registry.

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