Workflows

Extracting Quantities from HyperLEDA (1)

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This workflow receives the name of the property to compare and a file with a list of names of galaxies. The property name must be the same used in the HTML file returned by the HyperLEDA service. The workflow calls to HyperLEda service, using as input the names of the galaxies in order to get a HTML file with information about each galaxy. From each HTML file, it extracts the value of the property selected by the user. The workflow uses a python tool to parse the HTML file (one for each gala...

Created: 2011-10-05 | Last updated: 2011-10-05

What's the Season? (1)

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When given a list of astronomical object names, this workflow will check them against a simple Excel spreadsheet and return which season the object is best observed in. It will also compare the distances to the objects in a Google Charts bar chart. A later version of this may switch to a scatter plot, depending on whether or not this works with the Google Chart API. Running this workflow requires Python. Sys and string should be bundled in Python, but the numpy module will need to be downloa...

Created: 2011-10-05 | Last updated: 2011-10-05

Attributions: Spreadsheet Import Example

Extract Gene Sequence with Kepler (1)

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This is a workflow which allows one to extract gene sequence information using the accession number as the input.  Multiple outputs include a file output of sequence header information, as well as one output window of base pair count, ratios and gene sequence.

Created: 2011-10-05 | Last updated: 2011-10-05

Credits: Wdsnellg

Retrieve Molecular Interactions from PSICQ... (1)

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Retrieve Molecular Interactions from PSICQUIC Services for a list of Protein Accessions in PSI-MITAB format

Created: 2011-10-05 | Last updated: 2011-10-05

Credits: Rafael C. Jimenez

Comparing Quantities using HyperLEDA (1)

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This workflow receives the name of the property to compare, a file with a list of names of galaxies, and a file with the list of original values of that property. The property name must be typed in the same way used in the HTML returned by HyperLEDA The workflow calls to HyperLEDA using the names of the galaxies as input, and it returns a HTML file with information about the galaxy. This file is parsed by the python tool "ExtractPropertyValues", that extracts the value of the property introdu...

Created: 2011-10-03

[untitled] (1)

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 æˆ‘的第一个工作流，测试

Created: 2011-10-03 | Last updated: 2011-10-03

Credits: Zhaoyingguang

Find Orthologs for proteins in Ensembl (1)

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Find Orthologs for proteins in Ensembl using biomart.

Created: 2011-10-03 | Last updated: 2011-10-03

Credits: Rafael C. Jimenez

Biomart datasets for the Ensembl Genes mar... (1)

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Retrieve Biomart datasets for the Ensembl Genes mart service (one dataset per specie).

Created: 2011-10-03

Credits: Rafael C. Jimenez

Calculating galaxies distances using data ... (1)

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This workflow needs two inputs: a file with the list of the names of galaxies whose distance are going to be calculated (name galaxy file), and a file with our values of velocity for each galaxy (local velocity file). This workflow is composed by 5 nested workflow. The first one is used to read line by line the name galaxy file. This list of names is the input for the following two nested workflows. One of them uses the line with the name of galaxy to call HyperLEDA and to extract the veloci...

Created: 2011-10-01 | Last updated: 2011-10-03

Fetch dinosaur comic (1)

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This workflow fetches a comic from http://qwantz.com  

Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Chrisser

Simple Mathematics example (1)

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This workflow is an example of how Kepler can be used to perform a simple mathematics operation. This example is based on Kepler example file "01-SimpleAddition.xml".  

Created: 2011-09-28

Credits: Chrisser

Hello Hipster World (1)

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This workflow takes 5 constants and outputs five lines of text. In this example, the constant boxes are filled with meaningless text copied and pasted from http://hipsteripsum.me.   This workflow is a modification to the "04-HelloWorld.xml" example file that comes with Kepler.

Created: 2011-09-28

Credits: Chrisser

Make cat and girl date (1)

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Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Atminer

Fetch a cat and girl comic (1)

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Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Atminer

Kepler Comic (1)

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Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Mutanthumb

Absolute Value (1)

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Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Mutanthumb

Hello Hipster (1)

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Created: 2011-09-28 | Last updated: 2011-09-28

Credits: Mutanthumb

Complex Addition Part 2 (1)

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This workflow provides a way to do more complex addition/subtraction (and mutliplication/division) operations in Kepler. All of the input values are completely customizable. This is the second of two workflows (the extra credit).   Based on the workflow 01-SimpleAddition.kar by Matt Jones (NCEAS) in May 2006. The workflow is packaged with Kepler.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Kayleigh Ayn Bohémier

Attributions: Complex Addition

Get Silly Vamp (1)

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This workflow grabs the Silly Vamp comic strip. It is inspired by the Taverna workflow to get the latest XKCD comic.   The comic date can be customized. Please right-click on "IMAGE NAME" and change the value to the specific date you want. The date format is   YYMMDD   For example, June 26, 2011 would be:   110626

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Kayleigh Ayn Bohémier

Complex Addition (1)

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 This workflow provides a way to do more complex addition/subtraction (and mutliplication/division) operations in Kepler. All of the input values are completely customizable.   Based on the workflow 01-SimpleAddition.kar by Matt Jones (NCEAS) in May 2006. The workflow is packaged with Kepler.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Kayleigh Ayn Bohémier

Hello Hipster (1)

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This script is based on the classic "Hello World" in Kepler created by Matt Jones (May 2006) at NCEAS.   It takes a string of phrases from the generator at http://hipsteripsum.me/ and consolidates the strings into one long paragraph.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Kayleigh Ayn Bohémier

Fetch Buni in Kepler (1)

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This Kepler allows one to fetch a Buni comic from the image URL.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Wdsnellg

Simple addition Kepler workflow expanded (1)

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This Kepler allows one to perform mathematical equations, including addition, subtraction, muliplication, and division. 

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Wdsnellg

String input for Kepler (1)

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This Kepler workflow allows one to display multiple strings together with the use of a display actor with its input multiport.  The result is each string output on a line, but all together.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: Wdsnellg

arithmetic (1)

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Created: 2011-09-24

Credits: Atminer

HipsterWorld (1)

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Created: 2011-09-24 | Last updated: 2011-09-24

Credits: Atminer

Comparing Quantities (1)

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This workflow receives the name of the property to compare, a file with a list of names of galaxies, and a file with the list of original values of that property. The property name must be the same used in the VOtable returned by the Vizier service. The workflow calls to sesame name resolver using as input the names of the galaxies and gets the coordinates. Then it calls to Vizier service and provides to it with the coordinates as input, in order to get a VOTable with information about each ...

Created: 2011-09-23

Simple protein distance phylogeny workflow (1)

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Performs a multiple alignment and makes a phylogeny using a distance method on a set of protein sequences  

Created: 2011-09-22 | Last updated: 2011-09-22

Fetch Image from a URL (1)

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This workflow in Kepler fetches an Image from a URL, and displays the image in a new window.

Created: 2011-09-22 | Last updated: 2011-09-22

Credits: tpacurtis

Simple Equation Solver (1)

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This workflow solves for the problem x = 3 : |(x+5)/(x-5)|.

Created: 2011-09-22 | Last updated: 2011-09-22

Credits: tpacurtis Matt Jones

Concatenated String of Sentences (1)

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A workflow that concatenates a series of sentences into a single string. Sample data is from hipsteripsum.me.

Created: 2011-09-22 | Last updated: 2011-09-22

Credits: tpacurtis Matt Jones

IST600 - Kepler string printing (1)

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This is an ultra basic Kepler workflow that prints a few strings. Need to know how to print string constants? Look here.  

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Chrisser

input list example (1)

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This workflow is a simple example of how to input a list of numeric values and perform some ultra-basic calculations using Rserve. The output is two separate numbers, the mean and standard deviation of the list of input values. img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; } .cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px...

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Chrisser

slightly more complicated Spreadsheet Impo... (1)

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Example using two instances of the SpreadsheetImport service to import data from  Excel spreadsheets. The workflow imports these file spreadsheets f and generates a graph comparing the data.img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; } .cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer ...

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Chrisser Wdsnellg tpacurtis

Attributions: Spreadsheet Import Example

IST600 - Spreadsheet Import Example (1)

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Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet FertilizerUse.xls and generates a graph from the date. The spreadsheet is available at http://www.myexperiment. org/files/568/download/FertilizerUse.xlsimg, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; } .cubbies-s...

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Chrisser

Failed 2 Chart Attempt (1)

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Tried to show 2 charts simulatneously.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Mutanthumb Alan Williams

Population histogram in R (1)

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This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Chrisser

Attributions:

Ag Spreadsheet Import (1)

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Based on Spreadsheet Import Example by David WithersSusan Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet file WaterUse.xlsx and generates a graph from the date. The source data is from http://data.gov.uk/

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Mutanthumb Alan Williams

Nested Mean Rshell (1)

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This workflow uses a nested workflow. The nested workflow takes a list of values and finds the mean and standard deviation for each list. The result of the nested workflow is then concatenated with a list of names using Dot Product for list handling.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Mutanthumb

Name resolver of galaxies parsing the outp... (1)

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This workflow ask for text file using "Select_file" local services. This file is read by the "read_text_file", using "utf-8" as encoding. The result of "read_text_file" is splitted in lines by "split_string_into_string_list_by_regular_expression" and each of this lines is the input for the Rest_servise. The REST service search for each line (each line contains one name of one galaxy) some information about that galaxy. The string is like: target=cig+1 service=NED(nedwww.ipac.caltech.edu) coo...

Created: 2011-09-21

Mean Rshell (1)

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Used the Rshell to find the MEAN and standard deviation of a list of values.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Mutanthumb

New Population Histogram (1)

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This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population Based on Population histogram in R by Alan R Williams

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Mutanthumb

Name resolver of galaxies parsing the outp... (1)

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This workflow ask for text file using "Select_file" local services. This file is read by the "read_text_file", using "utf-8" as encoding. The result of "read_text_file" is splitted in lines by "split_string_into_string_list_by_regular_expression" and each of this lines is the input for the Rest_servise. The REST service search for each line (each line contains one name of one galaxy) some information about that galaxy. The string is like: target=cig+1 service=NED(nedwww.ipac.caltech.edu) coo...

Created: 2011-09-21 | Last updated: 2011-09-21

New York vs. New Jersey Broccoli Production (1)

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Uses the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports two files and generates a single graph comparing the information from the two spreadsheets.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: tpacurtis Alan Williams

Attributions: Spreadsheet Import Example NY Broccoli Production NJ Broccoli Production

Python Average and Standard Deviation (2)

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This workflow uses a Python script to take a provided filename (or list of filenames) containing numbers (one per line) and return the standard deviation and average (or mean).

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Kayleigh Ayn Bohémier

Attributions: Executes Python script Input for PS3 #2 Part 1

Standard Deviation From a Text File: Neste... (1)

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This workflow takes an input file of a list of numbers and runs it through a simple Python script to produce the standard deviation and average.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Kayleigh Ayn Bohémier

Attributions: Standard Deviation and Mean Values from a Text File Input for PS3 # 2 Part 2

Standard Deviation and Mean Values from a ... (1)

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This incredibly awkward script has another embedded script associated with it. It essentially smashes the output from the other workflows together using a Beanshell script.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Kayleigh Ayn Bohémier

Attributions: Input for PS3 # 2 Part 2

Broccoli: A State Comparison (1)

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Imports data from NY and NJ to compare broccoli harvest vs. planting rates across the two states. The workflow is currently set to evaluate data from 1960 to 1965. Source: Compiled by ERS from data of USDA, National Agricultural Statistics Service, Vegetables Final Estimates.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Kayleigh Ayn Bohémier

Attributions: Spreadsheet Import Example NJ Broccoli Production NY Broccoli Production

US Consumption of Plant Nutrients (1)

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This workflow takes data from the ERS, TVA (Tennessee Valley Authority), AAPFCO (Association of American Plant Food Control Officials), and the TFI (The Fertilizer Institute) and represents them in a bar chart.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: Kayleigh Ayn Bohémier

Attributions: Spreadsheet Import Example US Fertilizer Use

Spreadsheet Import Fertilizer Use (1)

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Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet file FertilizerUse.xlsx and generates a graph from the date. The source data is from http://www.myexperiment. org/files/568/download/FertilizerUse.xls and ERS, TVA (Tennessee Valley Authority), AAPFCO (Association of American Plant Food Control Officials), TFI (The Fertilizer Institute).

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: tpacurtis Alan Williams

Attributions: Spreadsheet Import Example US Fertilizer Use