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For Workflow: Find compounds pharmacology targets in Open PHACTS
Find compounds pharmacology targets in Ope... (2)
Look up concept URI from freetext, e.g. "aspirin", find compound pharmacology and their target info. For each target, blast+tree on its sequence - if any.
Uses the Open PHACTS API https://dev.openphacts.org/docs/1.5.
Notice that in tihs workflow, most concepts won't have compounds, and most compounds won't have targets, and most targets won't have a sequence - Open PHACT API wise this means this workflow would be propagating 404 Not Found errors.
Until there is a Local worker to filter out...
Created: 2013-10-16 | Last updated: 2015-11-19
Credits: Stian Soiland-Reyes
Attributions: Find compounds pharmacology and align against target sequences