NCBI_QBLAST

Created: 2008-06-07 15:05:00      Last updated: 2008-06-07 17:11:36

Perform an NCBI BLAST sequence similarity search using NCBI's QBLAST service (see http://www.ncbi.nlm.nih.gov/BLAST/Doc/urlapi.html). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.

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Workflow Other workflows that use similar services (46)

Only the first 2 workflows that use similar services are shown. View all workflows that use these services.


Workflow Sequence_or_ID_or_GI (1)

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Get a sequence in fasta format given one of: An NCBI GI number (e.g. 75251068). An entry identifier in database:identifier format (e.g. uniprot:Q96247). 3. A sequence entry in a format supported by EMBOSS seqret.

Created: 2008-06-07

Credits: User Hamish McWilliam

Attributions: Workflow Structure_or_ID

Workflow tRNAscan (1)

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Search a nucleotide sequence for tRNA genes using the tRNAscan-SE tool (see http://wiki.bioinformatics.org/TRNAscan-SE). This workflow uses the tRNAscan service at VBI PathPort (see http://pathport.vbi.vt.edu/services/#predict_7).

Created: 2008-06-28

Credits: User Hamish McWilliam

Attributions: Workflow Sequence_or_ID_or_GI