Molecular Interactions from IntAct PSICQUIC service (REST)

Created: 2011-05-29 01:32:18 Last updated: 2011-10-05 00:20:00

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Get molecular interaction data in psi-mitab25 from IntAct through its REST PSICQUIC service. As input you can use an Uniprot Acc like "P99999" or a MIQL query like "alias:KHDRBS1".

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Workflow Components

Authors (1)

Titles (1)

Descriptions (1)

Dependencies (0)

Inputs (1)

Name	Description
MIQL_query	MIQL query ... http://code.google.com/p/psicquic/wiki/MiqlReference … however Taverna will not allow any MIQL query including an empty space (even URL encoded). i.e. neither "alias:(KHDRBS1 OR HCK)" nor "alias:(KHDRBS1%20OR%20HCK)"

Processors (4)

Name	Type	Description
IntAct_PSICQUIC_REST_Service	rest
maxResults_value	stringconstant	Value 999999999
firstResult_value	stringconstant	Value 0
format_value	stringconstant	Value tab25

Beanshells (0)

Outputs (2)

Name	Description
MITAB	Molecular interactions results in MITAB format ... http://code.google.com/p/psicquic/wiki/MITAB26Format
status	HTTP response status codes ... http://en.wikipedia.org/wiki/List_of_HTTP_status_codes

Datalinks (6)

Source	Sink
MIQL_query	IntAct_PSICQUIC_REST_Service:query
maxResults_value:value	IntAct_PSICQUIC_REST_Service:maxResults
firstResult_value:value	IntAct_PSICQUIC_REST_Service:firstResult
format_value:value	IntAct_PSICQUIC_REST_Service:format
IntAct_PSICQUIC_REST_Service:responseBody	MITAB
IntAct_PSICQUIC_REST_Service:status	status