Get names of proteins similar to RNA binding proteins (Simple example SADI workflow)

Created: 2011-05-18 15:24:56 Last updated: 2011-05-18 15:39:02

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A very simple demo workflow using some existing SADI services. It finds UniProt proteins of GO function "RNA Binding", it then runs a BLAST service to find similar UniProt proteins and then outputs their names.

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Workflow Components

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Inputs (0)

Processors (4)

Name	Type	Description
UniProt info	sadi	Endpoint http://biordf.net/sparql
getGOTermAssociations	sadi	Endpoint http://biordf.net/sparql
GO_Record_value	stringconstant	Value GO:0000182
BLAST Uniprot by ID	sadi	Endpoint http://biordf.net/sparql

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Outputs (1)

Name	Description
Genes

Datalinks (4)

Source	Sink
BLAST Uniprot by ID:is homologous to (UniProt_Record)	UniProt info:UniProt_Record
GO_Record_value:value	getGOTermAssociations:GO_Record
getGOTermAssociations:is function of (UniProt_Record)	BLAST Uniprot by ID:UniProt_Record
UniProt info:hasName (name)	Genes