EBI_NCBI_BLAST
This workflow performs an NCBI blast at the EBI. It accepts a protein sequence as input. Default values have been set for the search database (Uniprot), the number of hite to return (10), and all scoring and matrix options. These can be changed in the workflow by altering the string constant values if required. This workflow uses the new EBI services. They are asynchronous and so require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.
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EBI NCBI BLAST filter e-value and length
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FINAL VERSION
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Created: 2010-11-29 | Last updated: 2013-03-28
Attributions:
EBI_NCBI_BLAST
NCBI BLAST (SOAP)
Created: 2010-11-29 | Last updated: 2013-03-28
Credits:
Hamish McWilliam
Attributions:
EBI_NCBI_BLAST
NCBI BLAST (SOAP)
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