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For Workflow: Compare two genomes for similarity
Compare two genomes for similarity (4)
This workflow takes the file path to two genome nucleotide files in fasta format and requests a minimum similarity required from the user. The genomes are aligned according to the M-GCAT algorithm (http://alggen.lsi.upc.es/recerca/align/mgcat/intro-mgcat.html) and the genome similarity parsed out of the resultant log file. Output is either 0 (genome similarity less than required similarity) or 1 (genome similarity equal to or greater than the required similarity).
NB - The file p...
Created: 2010-03-17 | Last updated: 2010-03-17
Credits: Gregg Iceton