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Workflow
Transform XML with parameters
(1)
Similar to Transform_XML local widget but accepts transformation parameters and skips the part with writing to the output file. The essence, i.e. Transform_XML beanshell works with Strings representing file contents, not with file URLs. The XML transfomation parameters are given as a list of strings in the "param_name = param_value" format.
Created: 2010-11-29
| Last updated: 2010-11-29
Credits:
trybik
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Workflow
Lemmatization
(3)
The workflow lemmatizes the text in the input port.
Takes text as input and returns (language dependent) lemmatized text as output. All the words in the resulting text are in the same order as in the original text, but they are transformed to their dictionary form.
The workflow asks for the language of lemmatization. Currently, 12 languages are supported: en,sl,ge,bg,cs,et,fr,hu,ro,sr,it,sp.
Created: 2010-12-17
| Last updated: 2010-12-23
Credits:
Petra Kralj Novak
Attributions:
Select from a list of possible web service parameter values
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Workflow
Get survey data from SurveyMapper
(2)
Extracting public data (such as public surveys and their questions) from SurveyMapper. SurveyMapper (http://www.surveymapper.com/) a free real-time geographic survey and polling tool from the nice people at the Centre for Advanced Spatial Analysis, University College London.
Created: 2010-04-21
| Last updated: 2010-06-18
Credits:
Alex Nenadic
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Workflow
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Workflow
Terms from collection of PDF files
(2)
This workflow will give you a set of candidate terms for each PDF document in a user-specified directory. You can also specify a c-value threshold that will restrict the terms to those with higher scores.
This workflow was created using only nested workflows. These workflow components work on their own and can be linked together to form more complex workflows such as this. You can view the text mining workflow components in this pack.
If you receive errors when running this workflow t...
Created: 2010-02-19
| Last updated: 2011-12-13
Credits:
James Eales
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Workflow
REST access of xml.nig.ac.jp (WABI)
(1)
This workflow has a beanshell script for composing the REST URL for the services at xml.nig.ac.jp (WABI) This URL is passed to the local worker Get_web_page_from_URL that fetches the requested data.
Note: This is a proof of concept of accessing REST services through Taverna. All of WABI's services can more easily be browsed and used in Taverna by adding their WSDL, for instance http://xml.nig.ac.jp/wsdl/GetEntry.wsdl
The example invokes the getDDBJEntry(accession) method of the getE...
Created: 2008-10-14
| Last updated: 2008-10-14
Credits:
Stian Soiland-Reyes
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Workflow
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Workflow
Test SOAP/WSDL Service Availability
(1)
This workflow tests for all Taverna workflows stored at myExperiment wether the SOAP/WSDL services used still exists. For each SOAP/WSDL service it checks wether the WSDL file is still accessible and whether the operation is still exists.
The output is among others a report of
accessible services and operation,
operations which WSDL file is not accessible,
operations which WSDL file still exists, but the operation is not defined anymore.
The last set needs to be checked by hand, because...
Created: 2009-05-29
Credits:
Wassinki
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