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Workflow
Use Case B, KNIME workflow
(1)
Workflow used to obtain data for the research paper ‘The application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to support Drug Discovery Research’, PLoS One. 2014 Dec 18; 9(12):e115460. PMID: 25522365; authored by Joseline Ratnam, Barbara Zdrazil, Daniela Digles, Cuadrado-Rodriguez E, et al. This workflow can be used to retrieve data and perform the analysis described in use case BRequirements:- Knime v2.9- Open PHACTS Knime nodes version 1.0.0 (DON'...
Created: 2014-11-20
| Last updated: 2015-11-03
Credits:
Barbara Zdrazil
Emiliano Cuadrado
Daniela Digles
Lars Richter
Open PHACTS
Workflow
Use Case C, Worflow 4
(1)
Workflow used to obtain data for the research paper ‘The application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to support Drug Discovery Research’, currently submitted to PLOS ONE. Requirements:- Knime v2.9- Open PHACTS Knime nodes 1.0.0 (DON'T use any later version!): https://github.com/openphacts/OPS-KnimeInstallation:- Download "org.openphacts.utils.json_1.0.0.zip" and unzip it in the plugins folder of your KNIME installation- Download ...
Created: 2014-05-27
| Last updated: 2014-11-25
Credits:
Emiliano Cuadrado
Joseline Ratnam
Daniela Digles
Open PHACTS
Workflow
Use Case C, Worflow 2
(1)
Workflow used to obtain data for the research paper ‘The application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to support Drug Discovery Research’, currently submitted to PLOS ONE. Requirements:- Knime v2.9- Open PHACTS Knime nodes version 1.0.0 (DON'T use any later version!): https://github.com/openphacts/OPS-KnimeInstallation:- Download "org.openphacts.utils.json_1.0.0.zip" and unzip it in the plugins folder of your KNIME installation- D...
Created: 2014-05-26
| Last updated: 2014-11-25
Credits:
Emiliano Cuadrado
Joseline Ratnam
Daniela Digles
Open PHACTS
Workflow
Use Case C, Worflow 1
(1)
Workflow used to obtain data for the research paper ‘The application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to support Drug Discovery Research’, currently submitted to PLOS ONE. This workflow can be used to get approved drugs from a pathway of interest using the Open PHACTS APIRequirements:- Knime v2.9- Open PHACTS Knime nodes 1.0.0 (DON'T use any later version!): https://github.com/openphacts/OPS-KnimeInstallation:- Download "org.openphacts...
Created: 2014-05-26
| Last updated: 2014-11-25
Credits:
Emiliano Cuadrado
Joseline Ratnam
Daniela Digles
Open PHACTS
Workflow
Use Case C, Worflow 3
(1)
Workflow used to obtain data for the research paper ‘The application of the Open Pharmacological Concepts Triple Store (Open PHACTS) to support Drug Discovery Research’, currently submitted to PLOS ONE. Requirements:- Knime v2.9- Open PHACTS Knime nodes 1.0.0 (DON'T use any later version!): https://github.com/openphacts/OPS-KnimeInstallation:- Download "org.openphacts.utils.json_1.0.0.zip" and unzip it in the plugins folder of your KNIME installation- Download ...
Created: 2014-05-27
| Last updated: 2014-11-25
Credits:
Emiliano Cuadrado
Joseline Ratnam
Daniela Digles
Open PHACTS