User: Sophia katrenko

Name: Sophia katrenko

Joined: Monday 10 December 2007 21:50:09 (UTC)

Last seen: Monday 10 December 2007 22:03:39 (UTC)

Email (public): Not specified

Website: Not specified

Location: Not specified

1 Friend

0 Groups (admin)

1 Group (member)

0 Favourites

Sophia katrenko has been credited 2 times

Sophia katrenko has an average rating of:

0.0 / 5

(0 ratings in total)

for their items

Description/summary not set

Other contact details:

Not specified

Interests:

Not specified

Field/Industry: Not specified

Occupation/Role(s): Not specified

Organisation(s):

Not specified

Note: some items may not be visible to you, due to viewing permissions.

Workflow

Taverna 1

Uploader

Marco Roos

BioAID_EnirchBioModelWithProteinsFromText (7)

Download

This workflow is for demonstration purposes only. Please contact the authors if you wish to try it. We will gladly collaborate with you. Summary This workflow extracts proteins and protein relations from Medline. Extracted protein names (symbols of at least 3 characters) are validated against mouse, rat, and human UniProt symbols, so the results are limited to these species. This workflow follows the following basic steps: it retrieves documents relevant for the query string i...

Created: 2009-05-16 | Last updated: 2009-05-16

Credits: Marco Roos Sophia katrenko Andrew Gibson M. Scott Marshall Willem van Hage Edgar Martijn Schuemie AID

Workflow

Taverna 1

Uploader

Marco Roos

Discover_entities (2)

Download

This workflow contains the 'Named Entity Recognize' web service from the AIDA toolbox, created by Sophia Katrenko. It can be used to discover entities of a certain type (determined by 'learned_model') in documents provided in a lucene output format. Known issues: The output of NErecognize contains concepts with / characters, breaking the xml. For post-processing its results it is better to use string manipulation than xml manipulations. The output is per document, which means entities will ...

Created: 2007-12-10 | Last updated: 2007-12-10

Credits: Marco Roos Sophia katrenko AID

What is this?

Linked Data

Non-Information Resource URI:

Alternative Formats