Note: some items may not be visible to you, due to viewing permissions.
Workflow
Human Microarray Analysis
(1)
This workflow takes in probesets from and AffyMetrix Affy HG U133A micorarray experiment and returns: genes ; gene start and end positions; chromosome where genes reside; ensembl trasncripts; SwissProt ids. The final output of the workflow is a list of candidate pathways which are linked to the genes expressed in the microarray data.
Example input for this workflow is:
212283_at
221634_at
220399_at
Created: 2008-02-08
| Last updated: 2009-12-03
Credits:
Paul Fisher
Remove from favourites
Workflow
HUMAN Microarray CEL file to candidate pat...
(4)
This workflow takes in a CEL file and a normalisation method then returns a series of images/graphs which represent the same output obtained using the MADAT software package (MicroArray Data Analysis Tool) [http://www.bioinf.manchester.ac.uk/MADAT/index.html]. Also returned by this workflow are a list of the top differentialy expressed genes (size dependant on the number specified as input - geneNumber), which are then used to find the candidate pathways which may be influencing the observed ...
Created: 2007-10-03
| Last updated: 2009-11-26
Remove from favourites