User: Reinout van Schouwen

Name: Reinout van Schouwen

Joined: Friday 12 November 2010 09:40:07 (UTC)

Last seen: Wednesday 30 October 2013 14:06:58 (UTC)

Email (public): r.m.van_schouwen [at] lumc.nl

Website: http://www.biosemantics.org/

Location: Leiden / Rotterdam, Netherlands

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Reinout van Schouwen has been credited 15 times

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Field/Industry: Bioinformatics

Occupation/Role(s): Scientific developer

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BioSemantics / Leids Universitair Medisch Centrum

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Workflow

Taverna 2

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Marco Roos

Match gene lists based on information in l... (7)

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[THIS WORKFLOW IS IN BETA STAGE] This workflow computes the match between two lists of Entrez Gene Identifiers by means of concept profile matching (Jelier et al., van Haagen et al.). The result of this is a list of concepts ordered by their matching score (the length of the list set by maxMatchNr). Of this list the summed scores are explained by computing the concepts that contribute most to the combination of the matching genes. Example to explain (by analogy): When a group of informatic...

Created: 2012-04-17 | Last updated: 2012-04-25

Credits: Marco Roos Reinout van Schouwen Eleni Kristina Hettne BioSemantics

Attributions: Match concept profiles Explain concept scores

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