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Items tagged with "semantic" (8)

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Paolo

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Janus provenance graph (RDF)

Created: 2010-06-08 23:02:53 | Last updated: 2010-06-09 22:48:46

Credits: Paolo

License: Creative Commons Attribution-Share Alike 3.0 Unported License

RDF instance file containing the entire provenance graph for once run of the PC1 mockup workflow. The RDF graph complies with the Janus ontology, which can be viewed here Caveat: implementation still under testing, file may still contain bugs

File type: RDF data

Comments: 0 | Viewed: 80 times | Downloaded: 41 times

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Groups (4)

Owner

Tony Linde

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SKUA

Unique name: skua
Created: Wednesday 09 January 2008 17:49:07 (UTC)

SKUA is a JISC-funded project (Jan'08-Jun'09) which intends the creation of a semantic infrastructure for astronomy based on the organisation of assertion services with relatively simple interfaces. As a testbed for these services, we propose a social application called Spacebook in which individuals will be able to create and share queries, workflows and assertions about VO resources, in addit...

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Marco Roos

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e-science support team for NBIC

Unique name: eScienceSupportTeam4NBIC
Created: Sunday 16 March 2008 22:23:11 (UTC)

This group brings together scientists with expertise in both (medical) bioinformatics and e-science. The members can give advice to bioinformaticians who want to adopt an 'e-science approach'. They want to share their expertise and experience for the application of technologies such as workflow, web/biomoby services, grid, semantic web, etcetera. The group was founded in particular for the Du...

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+ 5 others

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Owner

Jan Velterop

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CWA-Working Group 3.2 ConceptWiki

Unique name: ConceptWiki
Created: Wednesday 29 July 2009 16:03:54 (UTC)

This CWA Working Group is concerned with the CWA ConceptWiki and its relationship to other scientific Wikis. This place on MyExperiment will serve as a common forum for the Working Group.

3 shared items | 3 announcements

Members (21):

+ 15 others

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Owner

Marco Roos

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BioSemantics

Unique name: biosemantics
Created: Thursday 30 June 2011 13:06:48 (UTC)

Group for members of the BioSemantics group and their close collaborators.BiosemanticsWith the explosion of information in the biomolecular field, there is a dire need for information technology that assists in retrieving, extracting, and relating information and knowledge in the biomedical literature and databases. Biosemantics researchers and developers develop, evaluate, and apply such techn...

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+ 8 others

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Workflows (3)

Taverna 2

Uploader

Marco Roos

Match concept profiles (6)

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Purpose of workflow: The workflow can be used to match a set of concept profiles with another set of concept profiles. Result: A list of concepts ordered by their match to the query concept profiles.

Created: 2011-12-02 | Last updated: 2014-07-14

Credits: Marco Roos Kristina Hettne Martijn Schuemie Reinout van Schouwen

Taverna 2

Uploader

Marco Roos

Match gene lists based on information in l... (7)

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[THIS WORKFLOW IS IN BETA STAGE] This workflow computes the match between two lists of Entrez Gene Identifiers by means of concept profile matching (Jelier et al., van Haagen et al.). The result of this is a list of concepts ordered by their matching score (the length of the list set by maxMatchNr). Of this list the summed scores are explained by computing the concepts that contribute most to the combination of the matching genes. Example to explain (by analogy): When a group of informatic...

Created: 2012-04-17 | Last updated: 2012-04-25

Credits: Marco Roos Reinout van Schouwen Eleni Kristina Hettne BioSemantics

Attributions: Match concept profiles Explain concept scores

Taverna 2

Uploader

Ian Dunlop

Free text search to Concept Wiki URI (4)

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Free text search of concept wiki using the Openphacts "Map free text to a concept url based on semantic tag" ie /search/byTag. Search for either compounds or targets depending on the input uuid for "searchType" and filter by source authority with the "branch" input

Created: 2013-06-24 | Last updated: 2013-06-24

Credits: Ian Dunlop Katy Wolstencroft Marco Roos paul groth

What is this?

Linked Data

Non-Information Resource URI: http://myexperiment.org/tags/683

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