Tag Results

Items tagged with "growth rates (lambda)" (9)

Note: some items may not be visible to you, due to viewing permissions.

Files (4)

Uploader

Maria Paula Balcazar-Vargas

Project

View

Download

Matrix Population Models construction and analyses d...

Created: 2014-07-25 10:48:13 | Last updated: 2014-07-25 10:50:17

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Attributions: Matrix Population Model construction and analysis v20

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Matrix Population Models construction and analyses Workflow provides an environment for create a stage-matrix with no density dependence and perform several analyses on it.Analyses:Eigen analysis.Age specific survival.Generation time (T).Net reproductive rate (Ro).Transient Dynamics.Bootstrap of observed census transitions (Confidence intervals of λ).Survival cur...

File type: Adobe PDF

Comments: 0 | Viewed: 77 times | Downloaded: 70 times

Tags:

analysis
|
biovel
|
bootstrap of observed census transitions
|
cohen’s cumulative distance
|
confidence interval of lambda
|
damping ratio
|
demography
|
eigen analysis
|
elasticity analysis
|
fundamental matrix (n)
|
generation time (t)
|
gentiana pneumonanthe
|
growth rates (lambda)
|
keyfitz’s delta
|
lambda or dominant eigenvalue
|
matrix
|
matrix population models
|
meaneta
|
net reproductive rate (ro)
|
package ‘popbio’ in r
|
package ‘popdemo’ in r
|
population
|
reproductive value (v)
|
sensitivity analysis
|
stable stage distribution (w)
|
stage matrix
|
vareta

Uploader

Maria Paula Balcazar-Vargas

Project

View

Download

Matrix Population Models analysis documentation

Created: 2014-07-25 10:55:42

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Attributions: Matrix Population Model analysis v12

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Matrix Population Models analysis Workflow provides an environment to perform several analyses on a stage-matrix with no density dependence.Analyses:Eigen analysis.Age specific survival.Generation time (T).Net reproductive rate (Ro).Transient Dynamics.Resample a projection matrix (Confidence intervals of λ).Survival curveKeyfitz’s ΔCohen’s cumul...

File type: Adobe PDF

Comments: 0 | Viewed: 58 times | Downloaded: 50 times

Tags:

Uploader

Maria Paula Balcazar-Vargas

Project

View

Download

Eigen analysis documentation

Created: 2014-07-25 11:18:44

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Attributions: Eigen analysis

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Eigen analysis workflow provides an environment for the analysis of a stage-matrix and perform several analyses on it.The Eigen analysis results are a set of demographic statistics:Lambda or dominant eigenvalue (λ).The stable stage distribution (w).The sensitivity matrixThe Elasticity matrix.Reproductive value (v).The damping ratio (ρ)

File type: Adobe PDF

Comments: 0 | Viewed: 65 times | Downloaded: 41 times

Tags:

Uploader

Maria Paula Balcazar-Vargas

Project

View

Download

Stage vectors, Survival and Growth rate curves (demo...

Created: 2014-07-25 12:41:06

Credits: Maria Paula Balcazar-Vargas Gerard Oostermeijer

Attributions: Stages vectors plots, Survival and Growth rate curves

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Stages vectors plots, Survival and Growth rate curves Workflow provides an environment to perform several analyses on a series of stage-matrices:Population projectionSurvival values calculations per stage per year and its respective plot;Growth rates (lambda) calculations per year and its respective plot;Stage Vectors calculations and their respective plots.

File type: Adobe PDF

Comments: 0 | Viewed: 52 times | Downloaded: 39 times

Tags:

Packs (3)

Creator

Maria Paula Balcazar-Vargas

Project

View

Download

Stage vectors, Survival and Growth rate curves (demo...

Created: 2014-04-03 08:11:33 | Last updated: 2014-07-25 12:41:24

This pack contains a workflow, a file and documentation (tutorial to run the workflow).The Stages vectors plots, Survival and Growth rate curves Workflow provides an environment to perform several analyses on a series of stage-matrices:Population projectionSurvival values calculations per stage per year and its respective plot;Growth rates (lambda) calculations per year and its respective plot;Stage Vectors calculations and their respective plots.

8 items in this pack

Comments: 0 | Viewed: 53 times | Downloaded: 25 times

Tags:

Creator

Maria Paula Balcazar-Vargas

Project

View

Download

Eigen analysis pack

Created: 2014-07-03 15:57:49 | Last updated: 2014-07-25 11:18:57

This pack contains a workflow, a file and documentation (tutorial to run the workflow).The Eigen analysis workflow provides an environment for the analysis of a stage-matrix and perform several analyses on it.The Eigen analysis results are a set of demographic statistics:Lambda or dominant eigenvalue (λ).The stable stage distribution (w).The sensitivity matrixThe Elasticity matrix.Reproductive value (v).The damping ratio (ρ).

3 items in this pack

Comments: 0 | Viewed: 50 times | Downloaded: 33 times

Tags:

Creator

Maria Paula Balcazar-Vargas

Project

View

Download

Transient dynamics pack

Created: 2014-07-04 10:59:17 | Last updated: 2014-07-25 12:17:07

This pack contains a workflow, a file and documentation (tutorial to run the workflow).The Transient dynamics or Calculate population growth rates by projection Workflow provides an environment to calculates the population growth rate and stable stage distribution by repeated projections of the equation n(t+1)=An(t) and to produce plots of the short-term dynamics and convergence to stable stage distribution using stage vector projections.Transient dynamic analysisPopulation projectionLambda o...

3 items in this pack

Comments: 0 | Viewed: 52 times | Downloaded: 38 times

Tags:

Workflows (2)

Taverna 2

Uploader

Maria Paula Balcazar-Vargas

Project

Parametric Bootstrap or Resample a project... (3)

Download

The Parametric Bootstrap or Resample a projection matrix Workflow provides an environment to resample a projection matrix using a multinomial distribution for transitions and a log normal distribution for fertilities (Stubben, Milligan, and Nantel. 2011). The resample is based on number of plants surveyed. The projection matrix A is first split into separate transition and fertility matrices. Dead fates are added to the transition matrix and the columns are then sampled from a Multinomial dis...

Created: 2014-06-18 | Last updated: 2014-07-25

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Attributions: Matrix Population Model analysis v12

Taverna 2

Uploader

Maria Paula Balcazar-Vargas

Project

Stages vectors plots, Survival and Growth ... (2)

Download

The Stages vectors plots, Survival and Growth rate curves Workflow provides an environment to perform several analyses on a series of stage-matrices: - Survival values calculations per stage per year and its respective plot; - Growth rates (lambda) calculations per year and its respective plot; - Stage Vectors calculations and their respective plots. ====================================================== This workflow requires an instance of Rserve on localhost This workflow has been creat...

Created: 2014-07-02 | Last updated: 2014-08-29

Credits: Maria Paula Balcazar-Vargas Mikolaj Krzyzanowski Jon Giddy Gerard Oostermeijer

What is this?

Linked Data

Non-Information Resource URI: http://www.myexperiment.org/tags/4195

Alternative Formats