Group: Wf4Ever

News

1. 

   Juandesant shared CSV to VOTable importer

   

   This module provides a VOTable representation of the CSV file being pointed by the csv_file_path, either as a POSIX local file path, or a URL.

   Monday 29 July 2013 17:33:49 (UTC)
2. 

   Jose Enrique Ruiz shared AstroTaverna Starter Pack

   This is a set of small snippets using AstroTaverna plugin, developed in the Wf4Ever project. The purpose of this pack is to make the design and development of astronomy Virtual Observatory workflows easier, learning by the example. AstroTaverna may be installed on Taverna 2.4 …

   Friday 12 April 2013 16:10:31 (UTC)
3. 

   Kristina Hettne shared Annotate a gene list with disease concepts

   

   Purpose: Currently, this workflow takes a list of genes and a concept set as input, calculates the matching score between these and finds the concept that contributes the most to the match. Author comments: The workflow is in Beta stage. It runs, but needs more testing with different parameter settin …

   Wednesday 06 February 2013 20:02:25 (UTC)
4. 

   Kristina Hettne shared Anni workflows

   Concept profile analysis is a knowledge discovery method that proved successful in generating hypotheses about molecular mechanisms explaining the results from genotype-phenotype studies. This technology has been implemented in the Anni standalone application ( http://biosemantics.org/anni ). This pa …

   Wednesday 06 February 2013 19:11:26 (UTC)
5. 

   Marco Roos shared Mining the Kegg pathway database with the top hits from a GWAS, thereby predicting which gene regulatory pathways may be altered as a result of genetic mutations in a subpopulation.

   

   Genome-Wide Association studies (GWAS) with metabolomic phenotypes yield several statistically significant SNP-metabolite associations. To understand the biological basis of the association, scientists typically dwell on identifying genes in the vicinity of the SNP and the possible pathways that the …

   Wednesday 30 January 2013 13:57:23 (UTC)
6. 

   Marco Roos shared Demo pack for wf4ever

   This pack is a mirror of the Demo pack for the wf4ever review Demo. You should not be using any of this for real work.

   Wednesday 30 January 2013 13:53:40 (UTC)
7. 

   Jose Enrique Ruiz shared Calculation of Luminosity Profiles for a Sample of Galaxies

   This document describes the "Luminosity Profiles" Research Object

   Saturday 05 January 2013 16:57:08 (UTC)
8. 

   Jose Enrique Ruiz shared Extraction of Properties from a Sample of Galaxies

   This document describes the "Galaxies Sample Selection" Research Object

   Saturday 05 January 2013 16:54:49 (UTC)
9. 

   Jose Enrique Ruiz shared Galaxies Sample Selection Research Object

    In order to understand the evolution of galaxies, detailed analysis of images plays a key role. During the last years telescopes working at different wavelengths have been imaging the whole sky. One example of this is the Sloan Digital Sky Survey. The generated images provides a wealth of infor …

   Saturday 05 January 2013 16:51:56 (UTC)
10. 

    Jose Enrique Ruiz shared D5.3v2 Calculation of Luminosity Profiles for a Sample of Galaxies extracted from Catalogues using Isolation Criteria

    This document describes the development of the second Golden Exemplar proposed in Work Package 5: Workflow Astronomy Preservation, and provides discussion about user-driven issues risen in this process and related with general objectives of the Wf4Ever project. The document pertains to the …

    Saturday 05 January 2013 16:45:48 (UTC)
11. 

    Jose Enrique Ruiz shared Luminosity Profiles Research Object

    In order to understand the evolution of galaxies, detailed analysis of images plays a key role. During the last years telescopes working at different wavelengths have been imaging the whole sky. One example of this is the Sloan Digital Sky Survey. The generated images provides a wealth of information …

    Saturday 05 January 2013 16:34:47 (UTC)
12. 

    Jose Enrique Ruiz shared Environment

    

    From a previously selected cube of galaxies residing in a remote database, we provide extragalactic environment parameters for all galaxies sample. This workflow takes as input the path of the tabular *.pckl Python pickle dataset created in the previous workflow, as well as the database connection se …

    Friday 04 January 2013 20:41:32 (UTC)