Content from the BioVeL internal group

Search filter terms
Filter by category
Filter by type
Filter by tag
Filter by user
Filter by licence
Results per page:
Sort by:
Showing 176 results. Use the filters on the left and the search box below to refine the results.

Workflow Life Table Response Experiment Year Effect... (1)

Thumb
The Life Table Response Experiments Effect of Years in One Place workflow provides an environment to analyse two or more matrices from different years in one location. The objective of this workflow is to determine the effects of the research years (2 or more) in one place on ?. This workflow performs a fixed LTRE, one way design (Caswell 2001). LTRE is a retrospective analysis (Caswell 1989), beginning with data on the vital rates and on ? under two or more sets of environmental conditions...

Created: 2014-08-14

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Francisco Quevedo User Gerard Oostermeijer

Uploader
Project Biovel

Blob Life Table Response Experiments Fixed design Place e...

Created: 2014-08-14 08:03:58

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Francisco Quevedo User Gerard Oostermeijer

Attributions: Workflow Life Table Response Experiment fixed design Place Effect

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Life Table Response Experiments place effect workflow provides an environment to analyse one or more matrices (e.g. matrices of different years from the same place) from two or more places. The objective of this workflow is to determine the effects of the research places or localities (2 or more) on λ. This workflow performs a fixed LTRE, one way design (Caswell ...

File type: Adobe PDF

Comments: 0 | Viewed: 86 times | Downloaded: 54 times

Tags:

Workflow Life Table Response Experiment fixed desig... (1)

Thumb
The Life Table Response Experiments place effect workflow provides an environment to analyse one or more matrices (e.g. matrices of different years from the same place) from two or more places. The objective of this workflow is to determine the effects of the research places or localities (2 or more) on ?. This workflow performs a fixed LTRE, one way design (Caswell 2001). LTRE is a retrospective analysis (Caswell 1989), beginning with data on the vital rates and on ? under two or more set...

Created: 2014-08-13

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Francisco Quevedo User Gerard Oostermeijer

Creator
Project Biovel

Pack Log-log plots of variance vs. sensitivity and CV vs....


Created: 2014-08-13 10:27:13 | Last updated: 2014-08-21 09:16:30

This pack contains a workflow, a file and documentation (tutorial to run the workflow).This workflow creates log-log plots of both variance vs. sensitivity and CV vs. elasticity in matrix elements. Plots are based on Figure 2 in Pfister (1998).

8 items in this pack

Comments: 0 | Viewed: 39 times | Downloaded: 18 times

Tags:

Uploader
Project Biovel

Blob Alexandrium minutum potential distribution in the Ba...

Created: 2014-08-04 15:24:08 | Last updated: 2015-02-16 11:52:32

Credits: User Biomobst User Sarah Bourlat

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The potential distribution  of Alexandrium minutum in the Baltic Sea

File type: PNG image

Comments: 0 | Viewed: 48 times | Downloaded: 27 times

This File has no tags!

Uploader
Project Biovel

Blob Alexandrium minutum potential distribution

Created: 2014-08-04 15:21:24 | Last updated: 2015-02-16 11:53:00

Credits: User Biomobst User Sarah Bourlat

License: Creative Commons Attribution-Share Alike 3.0 Unported License

The potential distribution of Alexandrium minutum

File type: PNG image

Comments: 0 | Viewed: 61 times | Downloaded: 28 times

This File has no tags!

Creator
Project Biovel

Pack Mean matrix pack


Created: 2014-07-31 13:34:16 | Last updated: 2014-08-14 17:52:30

This pack contains a workflow, a file and documentation (tutorial to run the workflow).This mean matrix workflow estimates the mean matrix from a list of matrices.

8 items in this pack

Comments: 0 | Viewed: 46 times | Downloaded: 23 times

Tags:

Creator
Project Biovel

Pack Calculate quasi-extinction threshold pack


Created: 2014-07-30 14:00:20 | Last updated: 2014-08-14 12:05:20

This pack contains a workflow, a file and documentation (tutorial to run the workflow).This workflow estimates by simulation the quasi-extinction probability time cumulative distribution function for a structured population in an independently and identically distributed (iid) stochastic environment. This workflow is based on the popbio package (stoch.quasi.ext - Calculate quasi-extinction threshold, Stubben, Milligan and Nantel, 2013) based on the The MATLAB code in Box 7.5 (Morris and Doak ...

8 items in this pack

Comments: 0 | Viewed: 50 times | Downloaded: 21 times

Tags:

Uploader
Project Biovel

Blob Simulate stochastic growth from a sequence of matric...

Created: 2014-07-30 13:47:47

Credits: User Maria Paula Balcazar-Vargas User Jon Giddy User Francisco Quevedo User Mikolaj Krzyzanowski User Gerard Oostermeijer

Attributions: Workflow Simulate stochastic growth from a sequence of matrices

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This documentation (tutorial to run the workflow) explains how to run a workflow that belongs to the pack with same name.The Simulate stochastic growth from a sequence of matrices Workflow provides an environment to simulate stochastic growth by projection using whole matrix selection techniques in an independently and identically distributed (iid) environment from a set of 2 or more projection matrices.Outputs:Equal selection dataStochastic projectionUnequal selection dataTo know more detail...

File type: Adobe PDF

Comments: 0 | Viewed: 48 times | Downloaded: 36 times

Tags:

Workflow Simulate stochastic growth from a sequence... (1)

Thumb
The Simulate stochastic growth from a sequence of matrices Workflow provides an environment to simulate stochastic growth by projection using whole matrix selection techniques in an independently and identically distributed (iid) environment from a set of 2 or more projection matrices. This workflow is based on the popbio package (script: stoch.projection - Simulate stochastic growth from a sequence of matrices, Stubben, Milligan and Nantel, 2013) based on the The MATLAB code in Box 7.3 (Mo...

Created: 2014-07-30 | Last updated: 2014-08-14

Credits: User Maria Paula Balcazar-Vargas User Mikolaj Krzyzanowski User Jon Giddy User Francisco Quevedo User Gerard Oostermeijer

Results per page:
Sort by: