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Pack Provenance Challenge 1 Workflow in Taverna


Created: 2010-05-28 07:21:42 | Last updated: 2010-06-21 16:15:46

includes - dummy processors version - test input file - complete provenance graph in OPM format (RDF/XML) - complete provenance graph in terms of the Janus ontology (RDF/XML)

4 items in this pack

Comments: 0 | Viewed: 64 times | Downloaded: 21 times

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Workflow Provenance Challenge 1 workflow -- mockup ... (1)

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simulates the image processing for the PC1 workflow using beanshell that simply track test strings an image is a pair (header, image) specified as a list of depth 1: [header,image] so each processor with image input takes an input list. Note that the processors are designed to operate on single images (except softmean that operates on a list of images), but because the initial input is a list of images, all are processed by implicit iteration.

Created: 2010-05-28

Credits: User Paolo

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Workflow Missing value count (1)

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This workflow enables users to filter examples by the number of missing values they contains; it inserts the numeric attribute 'Missings' - representing, for each example, the count of attributes with missing values.

Created: 2010-05-27 | Last updated: 2010-07-13

Workflow Plot round results of a backward elimination (1)

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This process will perform a backward elimination and logs all performance and deviation results of each round. This way, you can use the visualizations of rapidminer to asses the performance gain.

Created: 2010-05-26

Workflow Simple DPAS query (4)

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queries dpas for each time priode and instrument

Created: 2010-05-26 | Last updated: 2011-12-15

Credits: User Anja Le Blanc

Workflow Retrieve Instruments for event dates (2)

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Queries the HELIO ICS web service and returns a list of instruments available for the time periodes in VOTable format

Created: 2010-05-26

Credits: User Anja Le Blanc

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Workflow A simple CQL query workflow in caGrid (1)

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1. CQL is a language to query data from caGrid/caBIG services. This workflow is tested with Taverna 2.1.2 and the caGrid Workflow Suite downloadable from http://www.mcs.anl.gov/~wtan/t2/. 2.More information regarding CQL can be found from http://wiki.cagrid.org/display/dataservices. 3. Sample input (95) is provided in the workflow. It is to query all the hybridization data within a microarray experiment whose id is 95.

Created: 2010-05-24 | Last updated: 2010-05-25

Credits: User Wei Tan

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Workflow Query caArray data service and retrieving ... (2)

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need to install Taverna 2 caGrid integration suite from http://www.mcs.anl.gov/~wtan/t2/ and get a cagrid Dorian account (see http://wiki.cagrid.org/display/caGrid13/Home)

Created: 2010-05-24 | Last updated: 2010-05-24

Credits: User Wei Tan

Workflow simple HEC query (2)

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HEC query for table 'goes_xray_flare'

Created: 2010-05-21 | Last updated: 2010-08-04

Credits: User Anja Le Blanc

Blob ProStack Screencast: Segmentation of Images of Gene ...

Created: 2010-05-20 19:48:40

Credits: User Konstantin Kozlov

License: Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 Unported License

ProStack (Processing of Stacks) is a platform for image processing and analysis. It implements various image processing methods as separate modules, that can be joined in a complex image processing scenario by use of a graphical user interface. This video demonstrates the workflow for extraction of quantitative information on gene expression from confocal images. ProStack home page: urchin.spbcas.ru/downloads/ProStack/ProStack.htm Download:sourceforge.net/projects/prostack/

File type: AVI video

Comments: 0 | Viewed: 55 times | Downloaded: 22 times

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