myExperiment - Content

Taverna 2

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Jon Giddy

Test interaction page in myExperiment (9)

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This workflow demonstrates the feasibility of storing interaction pages in myExperiment

Created: 2014-02-04 | Last updated: 2014-02-06

Credits: Jon Giddy

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Jon Giddy

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Partition Years Interaction Page

Created: 2014-02-04 10:52:30 | Last updated: 2014-02-06 12:33:46

Credits: Jon Giddy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Interaction page to allow a range of years to be grouped

File type: htm

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Jon Giddy

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Partition Years Javascript

Created: 2014-02-04 10:50:20

Credits: Jon Giddy

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Javascript part of an interaction page to partition a range of years into groups.

File type: JavaScript

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Taverna 1

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Alice Heliou

Entrez Gene to KEGG Pathway (1)

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This workflow takes in Entrez gene ids then adds the string "ncbi-geneid:" to the start of each gene id. These gene ids are then cross-referenced to KEGG gene ids. Each KEGG gene id is then sent to the KEGG pathway database and its relevant pathways returned.

Created: 2014-01-30

Credits: Alice Heliou

Taverna 1

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Alice Heliou

setp2 (1)

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Traduction test

Created: 2014-01-30 | Last updated: 2014-01-30

Credits: Alice Heliou

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Maria Paula Balcazar-Vargas

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Matrix Terschelling 89-90

Created: 2014-01-29 11:46:02 | Last updated: 2014-03-28 14:18:57

Credits: Gerard Oostermeijer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a .txt file of a stage matrix of the species: Gentiana pneumonanthe, collected and published by Gerard Oostermeijer (Instituut voor Biodiversiteit en Ecosysteem Dynamica (IBED), Universiteit van Amsterdam).This file allow users to run the workflows:Life Table Response Experiments (LTRE) Fixed design Place effects V1 (http://www.myexperiment.org/packs/574.html) and Life Table Response Experiments (LTRE)_Year Effect One Location V1 (http://www.myexperi...

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Maria Paula Balcazar-Vargas

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Matrix Terschelling 88-89

Created: 2014-01-29 11:44:47 | Last updated: 2014-03-28 14:18:17

Credits: Gerard Oostermeijer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a .txt file of a stage matrix of the species: Gentiana pneumonanthe, collected and published by Gerard Oostermeijer (Instituut voor Biodiversiteit en Ecosysteem Dynamica (IBED), Universiteit van Amsterdam).This file allow users to run the workflows:Life Table Response Experiments (LTRE) Fixed design Place effects V1 (http://www.myexperiment.org/packs/574.html) and Life Table Response Experiments (LTRE)_Year Effect One Location V1 (http://www.myexperi...

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Maria Paula Balcazar-Vargas

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Matrix Lochem 89-90

Created: 2014-01-29 11:42:38

Credits: Gerard Oostermeijer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a .txt file of a stage matrix of the species: Gentiana pneumonanthe, collected and published by Gerard Oostermeijer (Instituut voor Biodiversiteit en Ecosysteem Dynamica (IBED), Universiteit van Amsterdam).This file allow users to run the workflow Life Table Response Experiments (LTRE) Fixed design Place effects V1 (http://www.myexperiment.org/packs/574.html). If you use the file please quote as:Oostermeijer, J.G.B. M.L. Brugman, E.R. de Boer; H.C.M. Den ...

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Maria Paula Balcazar-Vargas

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Matrix Dwingeloo 1 88-89

Created: 2014-01-29 11:22:20

Credits: Gerard Oostermeijer

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is a .txt file of a stage matrix of the species: Gentiana pneumonanthe, collected and published by Gerard Oostermeijer (Instituut voor Biodiversiteit en Ecosysteem Dynamica (IBED), Universiteit van Amsterdam).This file allow users to run the workflow Life Table Response Experiments (LTRE) Fixed design Place effects 1 (http://www.myexperiment.org/packs/574.html) If you use the file please quote as:Oostermeijer, J.G.B. M.L. Brugman, E.R. de Boer; H.C.M. Den Nijs. 1...

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Maria Paula Balcazar-Vargas

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Life Table Response Experiments Fixed design Place e...

Created: 2014-01-29 10:42:06 | Last updated: 2014-08-14 08:04:25

This pack contains a workflow, a file and documentation (tutorial to run the workflow).The Life Table Response Experiments place effect workflow provides an environment to analyse one or more matrices (e.g. matrices of different years from the same place) from two or more places. The objective of this workflow is to determine the effects of the research places or localities (2 or more) on λ. This workflow performs a fixed LTRE, one way design (Caswell 2001). LTRE is a retrospectiv...

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