myExperiment - Workflows

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Taverna 2

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Julian Garrido

Curves Exploration (1)

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Exploration of curves of cubes that contain galaxy observations

Created: 2014-02-12

Credits: Julian Garrido

Taverna 2

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Kraxner

Converts any ImageMagick supported image f... (1)

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SCAPE Migration Component

Created: 2014-02-12

Credits: Markus Plangg

Taverna 2

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Renato De Giovanni

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loop_until_progress_complete (4)

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Loops until an asynchronous openModeller Web Service job is finished, i.e., keeps calling getProgress until it returns 100 (completed), -2 (aborted) or -3 (cancelled). NOTE: this is a "low level" component that was created to be used by other existing components, so end users may never need to use it at all.

Created: 2014-02-13 | Last updated: 2015-05-11

Taverna 2

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Markus Plangg

Imagemagick convert - tiff/png/bmp/jpeg2ti... (2)

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Converts tiff to tiff/png/bmp/jpeg using imagemagick convert with the provided compression

Created: 2014-02-14 | Last updated: 2014-11-06

Credits: Markus Plangg

Taverna 2

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Markus Plangg

Imagemagick convert - image2tiff - compres... (1)

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Converts images supported by imagemagick to tiff using imagemagick convert with the provided compression

Created: 2014-02-14

Credits: Markus Plangg

Taverna 2

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Maria Paula Balcazar-Vargas

Project

Matrix Population Model analysis v12 (2)

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The Matrix Population Models Workflow provides an environment to perform several analyses on a stage-matrix with no density dependence: - Eigen analysis; - Age specific survival; - Generation time (T); - Net reproductive rate (Ro); - Transient Dynamics; - Bootstrap of observed census transitions (Confidence intervals of lambda); - Survival curve; - Keyfitz delta; - Cohen's cumulative distance. This workflow requires an instance of Rserve on localhost This workflow has been created by the Bi...

Created: 2013-08-13 | Last updated: 2014-07-09

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Attributions: Creation of a stage matrix model from demographic monitoring of individuals in an animal or plant population Eigen analysis Age specific analysis Transient Dynamics. Generation time (T) Net reproductive rate (Ro) Demographic data Gentiana pneumonanthe 1987-1988 from Terschelling File.

Taverna 2

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Maria Paula Balcazar-Vargas

Project

Integral Projection Model for Demographic ... (1)

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This workflow constructs and analyses an IPM with only continuous stages and without ramet production based on the IPMpack (R). Information about the Input file: The data must be organized in a table (in .csv format), where each row represents one observation of an organism in the population at one census time t with the following column names: size: size of individuals in census time t sizeNext: size of individuals in census time t +1 surv: survival of individuals from census time t to t...

Created: 2013-08-13

Credits: Maria Paula Balcazar-Vargas Jon Giddy Gerard Oostermeijer

Taverna 2

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Bolette Jurik

Slim Migrate And QA mp3 to Wav Using Hadoo... (4)

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This workflow migrates an input list (available on HDFS) of mp3 files (available on NFS) to wav files (in output directory on NFS) using an ffmpeg Hadoop job. The workflow then compares content of the original mp3 and the migrated wav by first converting the two files to wav using an mpg123 Hadoop job and the identity function respectively, and then using an xcorrSound waveform-compare Hadoop job. The needed Hadoop jobs are available from https://github.com/statsbiblioteket/scape-audio-qa-ex...