myExperiment - Workflows

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Type: Bioclipse Scripting Language

Licence: MIT

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Bioclipse Scripting Language

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Egon Willighagen

Find concept-literature relationships and ... (1)

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This Bioclipse script (dev version) searches articles titles for the given concept and creates QuickStatements to create Wikidata statements that that article is about that concept.

Created: 2018-09-01

Credits: Egon Willighagen

Bioclipse Scripting Language

Uploader

Egon Willighagen

Groovy script to convert (part of) CGN dat... (1)

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Converts CGN data from [0] to RDF. It uses intermedia TSV files (never mind the file extensions) for the data tab. The 3char ISO country codes are available at [1], but ideally these are pulled out of Wikidata directly. The RDF uses the Darwin Core ontology, QUDT, and Wikidata (on top of regular stuff). This Groovy script uses Bioclipse (www.bioclipse.net) with the RDF plugin.Menting, Frank (2015): CGN tomato passport data. figshare. http://dx.doi.org/10.608...

Created: 2015-01-22

Credits: Egon Willighagen

Bioclipse Scripting Language

Uploader

Egon Willighagen

Map a Entrez Gene ID to a Gene Ontology ID (1)

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BSL Groovy script that uses BridgeDB to convert a Entrez Gene identifier into a Gene ontology identifier.

Created: 2012-01-07

Credits: Egon Willighagen

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