myExperiment - Workflows

Results per page:

Sort by:

Showing 7 results. Use the filters on the left and the search box below to refine the results.

Type: Taverna 2

Tag: demo

Remove all filters

Taverna 2

Uploader

Reinout van Schouwen

Explain concept scores (7)

Download

Purpose of workflow: This workflow takes two concept ids as input and returns the top ranking "B" concepts according to Swanson's ABC model of discovery, where the relationships AB and BC are known and reported in the literature, and the implicit relationship AC is a putative new discovery. It might also be the case that AC is already known. In that case AC does not represent a new discovery but will still be returned (see workflow example values). The B concepts are returned sorted on the pe...

Created: 2012-02-07 | Last updated: 2014-07-14

Credits: Reinout van Schouwen

Taverna 2

Uploader

Francois Belleau

Bio2RDF: CPath search, rdfise and load dem... (1)

Download

Search for a list of genes into the Pathway Commons interaction database and load the fetched triples into a triplestore. INSERT IN GRAPH < http://localhost/sesame/mem_rdf_db> { CONSTRUCT{ ?s, ?p, ?o . } FROM < http://www.pathwaycommons.org/pc/webservice.do> WHERE { SELECT ?s FROM <http://www.pathwaycommons.org/pc/webservice.do> ...

Created: 2009-02-19 | Last updated: 2009-02-19

Credits: Francois Belleau

Taverna 2

Uploader

Francois Belleau

Bio2rdf: Bind search, rdfise and load demo (1)

Download

INSERT IN GRAPH <http://localhost/sesame/mem_rdf_db> { CONSTRUCT { ?s, ?p, ?o . } FROM <http://soap.bind.ca/wsdl/bind.wsdl> WHERE { SELECT ?s FROM <http://soap.bind.ca/wsdl/bind.wsdl> WHERE { ?s, ?p, ?o . ...

Created: 2009-02-19 | Last updated: 2009-02-19

Credits: Francois Belleau

Taverna 2

Uploader

Francois Belleau

ChEBI mashup from searched string (1)

Download

A demo showing hoe to use SOAP services from Bio2RDF ChEBI SPARQL endpoint.A demo showing hoe to use SOAP services from Bio2RDF ChEBI SPARQL endpoint. First a full text search query is done, then we do a reverse link query to get all the related topic. Finally with a describe queries we obtain the complete graph of each topic. The ntriples result is a mashup of what is known about this searched topic form ChEBI. This graph can then be loaded in a triplestore for further exploration.